Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1059 ATGAGTCACAGCCACACATCCACGTTGCCTCGTCTTGTTTCCCTATTAAACTTTACGAGCCATAACAACATGGAACCTGAAAATCTACTTTCCCACAACAAAAGCCTCTACTCTACTACTGCTTCATCTTCTGCTCTTGAAAATTCAGTGCTCAAGCATGGCTTCGGCTACTCTCTCTGTAGCCAAACCAGCCCTTCAGTTTTTTCATTCTTTGGTCTATTCAGGCAAATGGGAAAGGCTTCTCTGAATTCTCTGGCCTCCGCAACTCATCAAGCTACCTTCCCTTTTCTAGAAAATCTTCAGAGGATTTCCATTCTGTCATTTCCTTCCAGACCTATGCAGATTGGAAGGAACTTCTTGAGGTGCTGGCACGGTCGCAAAGACTCCCCTCTTGATGTCATTGCCATCAACGACACCGGCGGTGTGAAACAAGCCTCTCACCTTCTCAAGTACGATTCCATCCTCGGAACCTTCGACGCTGTTGTCAAGCCTATTGGCAGCGATATCATCTCCGTCGATGGAAAGGAACTCAAAGTTGTCTCCGACCGCAACCCCGCCAACCTTCCTTGGAAGGAATTGGGGATAGACTTGGTGATTGAAGGAACAGGGGTGTTCGTAGACAGAGAAGGTGCTGGGAAGCACATTCAAGCAGGGGCTAAGAAGGTGCTCATCACTGCTCCTGGTAAAGGAGACATCCCAACCTACGTGGTTGGTGTCAATGAATATGATTACAGCCCAGATGAACCCATCATCAGCAATGCCTCTTGCACCACTAACTGCCTTGCACCCTTTGTCAAGGTCTATATGAATGGAACAACATCTGTCAAGAGAAGTATCATCAAGGGCACCATGACCACCACCCACTCCTACACTGGCGACCAGAGGCTTCTTGATGCGAGCCACCGCGACCTGAGGCGTGCGAGGGCAGCGGCACTCAACATAGTCCCCACGTCAACAGGAGCAGCAAAGGCAGTGGCTCTGGTGCTCCCAACCCTCAAGGGGAAGCTCAACGGCATCGCACTCCGCGTGCCGACACCGAACGTCTCAGTTGTGGACCTTGTTGTTCAGGTCTCGAAGAAAACCTTTGCAGAAGAAGTGAATGCAGCATTCAGAGAGAGTGCAGACAATGAGCTGAAGGGAATCCTCTCAGTGTGTGATGAGCCACTTGTGTCCGTTGACTTCAGGTGCACTGATGTGTCCTCGACCGTTGACTCCTCGTTGACCATGGTCATGGGAGATGACATGGTGAAGGTGATTGCTTGGTATGACAATGAGTGGGGCTACTCCCAAAGGGTTGTGGATTTGGCTGACATTGTTGCCAACAAATGGAAGTAG 1335 0.5004 MSHSHTSTLPRLVSLLNFTSHNNMEPENLLSHNKSLYSTTASSSALENSVLKHGFGYSLCSQTSPSVFSFFGLFRQMGKASLNSLASATHQATFPFLENLQRISILSFPSRPMQIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSILGTFDAVVKPIGSDIISVDGKELKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNEYDYSPDEPIISNASCTTNCLAPFVKVYMNGTTSVKRSIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1059 444 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 115 207 IPR020828 GO:0051287
Aed9g1059 444 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 114 444 - -
Aed9g1059 444 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 114 444 IPR020831 GO:0016620
Aed9g1059 444 Gene3D - 114 436 - -
Aed9g1059 444 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 254 261 IPR020830 GO:0016620
Aed9g1059 444 Gene3D Dihydrodipicolinate Reductase; domain 2 255 424 - -
Aed9g1059 444 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 115 266 IPR036291 -
Aed9g1059 444 SMART gp_dh_n_7 113 256 IPR020828 GO:0051287
Aed9g1059 444 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 115 434 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Aed9g1059 444 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 214 227 IPR020831 GO:0016620
Aed9g1059 444 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 338 355 IPR020831 GO:0016620
Aed9g1059 444 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 250 268 IPR020831 GO:0016620
Aed9g1059 444 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 378 393 IPR020831 GO:0016620
Aed9g1059 444 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 256 423 - -
Aed9g1059 444 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 277 422 IPR020829 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1059 Aed-Chr9 7748102 7752172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1059 K05298 - gmx:100815649 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1059 9 7748102 7752172 Aed9g1059 9 7748102 7752172 ECH