Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1056 ATGATTCCTCCTCTGACCAATAACTCAGTCTCTGTTCACCTGCGTGGAGTCCTACTACCTTGTGACCCTCTTCACCCAATTGCGTTGGATCCAATTCTAAACAAGCCTTGTTCCTCTGCCTCTCTGCTTTGGAACTGCAAGAGGAGTAGTAGGAAGAAGAAAAACTCCATTATTACTATGGCCTCTAATATCAGGACCAACAATTTCCTGCGCCATGTGGAATCAATGAAGCTTCAGCCATCAGGTGCTGGCCACATTTCACACCTCAACGCCGTGATTCTCGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTCCCAAGTGAGGACTTTGCAAGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGGAGATGTACAAGAGATCGATTGAGGATCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTTTACTGGAAACAGAGATGGGGTGATAAAGTGTGTGATGAGAATTTTGATGTTAGGAAAGGGAATATCAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATTTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTAGCCATTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACTTACACTCAGCTTCTCCAGCAAGTTTGTCAGCTTGCAAACTACCTAAAAGATATTGGTGTCAATAAGGGAGATGCTGTAATTATTTACTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCATGTGCCCGAATTGGTGCTGTTCATTCGGTATCACACAAGAACCTCATTATATTTTCCTTGCCACCATTTCTTGTTGTATTTGCTGGCTTTTCTGCAGAAGCTCTTTCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAACCTATCTATCTGAAAGATATTGTTGACACTGCAATCAATGATTCAGCCCCAAAAGGGGTCTCTATAGATAAATGCCTTGTTTATGAAAACCCATTGGCATTGAAGAGAGTAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCCTCATTATCCAACTACTTGTCCAGTGGAGTGGGTTGATGCTGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACCGCAACAACATTCAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGCACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTTCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGACATTGTTGACAAATATAAGGTGACACTATTCTACACTGCCCCCACTTTGGTGCGGTCTCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTCCTCAAGGAAATCCTTGCGAGTCCTAGGAAGTGTAGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACGGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTCTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAAAGGTGTTGAAATAGAAGGAGAGTGCAATGGGTATTTGTGTGTGAAGAAATCATGGCCTGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCTTTTGCCGGATACTATTTCAGCGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCACTGGAAGAGTTGATGATGTCATCAACGTCAGTGGACATCGAATTGGCACAGCAGAAGTGGAATCAGCTCTAGTTTCACATCCACAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCACGAGGTCAAAGGACAGGGTATCTATGCATTTGTTACAATTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGAACCTCGTACTCGCAGTTCGAAAGCAGGTCTATAGGAGCCTTTGCAGCACCAGACAAAATCCATTGGGCACCTGGCCTTCCGAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGCGAAAAATCGCTTCCAGGCAGCTGGATGA 2253 0.4496 MIPPLTNNSVSVHLRGVLLPCDPLHPIALDPILNKPCSSASLLWNCKRSSRKKKNSIITMASNIRTNNFLRHVESMKLQPSGAGHISHLNAVILGESLATEEDDFVLPSEDFASQANVQSPEQYLEMYKRSIEDPAGFWSEIASEFYWKQRWGDKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGTLTYTQLLQQVCQLANYLKDIGVNKGDAVIIYLPMLMELPIAMLACARIGAVHSVSHKNLIIFSLPPFLVVFAGFSAEALSQRIIDCKPKVVITCNAVKRGSKPIYLKDIVDTAINDSAPKGVSIDKCLVYENPLALKRVDTKWKEGRDIWWQDVIPHYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGSSVIVYEGAPNYPDAGRCWDIVDKYKVTLFYTAPTLVRSLMRDGDAFVTRSSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATLPFFGVQPVIVDEKGVEIEGECNGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTIVDGVPYSEELRKNLVLAVRKQVYRSLCSTRQNPLGTWPSENKEWKDNAKNSAKNRFQAAG 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1056 750 ProSitePatterns Putative AMP-binding domain signature. 386 397 IPR020845 -
Aed9g1056 750 Pfam Acetyl-coenzyme A synthetase N-terminus 124 184 IPR032387 -
Aed9g1056 750 Gene3D - 105 642 IPR042099 -
Aed9g1056 750 PANTHER ACETYL-COENZYME A SYNTHETASE 77 712 - -
Aed9g1056 750 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 119 712 IPR011904 GO:0003987|GO:0016208|GO:0019427
Aed9g1056 750 Pfam AMP-binding enzyme C-terminal domain 656 711 IPR025110 -
Aed9g1056 750 SUPERFAMILY Acetyl-CoA synthetase-like 111 712 - -
Aed9g1056 750 Pfam AMP-binding enzyme 193 647 IPR000873 -
Aed9g1056 750 Gene3D - 645 719 IPR045851 -
Aed9g1056 750 PANTHER ACETYL-COENZYME A SYNTHETASE 77 712 - -
Aed9g1056 750 MobiDBLite consensus disorder prediction 727 750 - -
Aed9g1056 750 CDD ACS 122 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1056 Aed-Chr9 7715073 7721657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1056 66 712 Acyl Lipid Metabolism Gene Families AT5G36880 80.526 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1056 K01895 - gmx:100789257 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1056 9 7715073 7721657 Aed9g1056 9 7715073 7721657 ECH