Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1038 ATGGCCTGCAATCCTTCCCTGCACGGGAACATGCATCAGCATCAGTTTCCGTTACAGAGCACAGAGTCAACGCCTTGTGACGCGGAATCAGCAGTGCCGGTGACCCTTTTGATAAAGCACTTGCCAGAAGCCATTCCTAATGACACCCTTTCTCGAATCTTAGCCAATTTCGGCGCTTCCTCTGTTCGCCCGTGCTCTAGTGGCAGGTTGAGAAATTGTGCTTTTGCGGATTTCAAAAATGAGATGGTGGCATCTCAAGCACAACGGCAACTAAATGGGTTGAGATTTCTTGGTAAAGTCTTGTCAGCAGAGAGAGCTAGTAACCCAACTGAGAATAGTGAAAAAAGTAGCAGTGATCAGCTGAAGGACTCTAAAACATCAATGCTGAAGAATGCAAATGTAATCAAACCTATTGATGGAGATAAAAAATCAGGAGGACTCCCTATTCCCGAGCCAATTGCTGATAGACTTGGTGTCAATTATCCATTTCCTCCTCAGCTTGAGTATGCTTACCCTCCACCTGATGGAAATATATTGACCAATATTGTGAATGCTCTAATTGCTGTTCCCCGCTTTTACACTCAGGTTCTACACTTGATGAACAAAATGAACATCCCGGCTCCATTTCGTATGGCACTGCCCACACCTCCATTACCTCCAGAGGTACCAGCACCACCCCCACCTCCTCCTACTGTAACTGTGAATCCTCACTCTACAGATCTGTCTAGTGGTGAATCGGAAATGGAATCTTCAGATGAGGAGGGTGAAGCAAGAACAAAAAAGCGTGTCAGGCGTGAGGCCATTGTTGGCCCTGCTATTGATAAAGGTGTGGCTCATGAGTCTGTTGGAGTAAAATCAGCCACCTTGGTTCCAAAAGAAATCCCTGTCATAAAAAAGAACCACGTCTTAAAGATTAACATTGTTCCCAAAGCAACACTGAATGAACATAAAGATGAAGAGACAGCACAAGAGTTACTAGAGCCAGAAAAAGATGTTCCAGATCCTAACAAATTTTTTACTCCAGATGAATTAGAGAAAGGAAAGTTGCCTCCCGAGCAAATCTTATCCCTTCCGATGTTTAAGAACTATACAGCTGGAAATCCTGCTCCTGTGTTGTATATTAAGAATTTGGCAAAAGATGTGATTGCCGATGATTTCTATTTTATATTTGGTGAGCTCTCAAGACTTTTACTGGATTCAGGGTCCTTGTTTGGAAGTATTGAGGCTGCTAAGTCTGGTCTTCAAGTCAAACTGATGCAGGAAGGACGAATGAGGGGTCAAGCATTCATAACATTTCCCTCAATTGAGTTGGCTCATCATGCTTTGAATCTAGTGAACGGATATGTATTAAAAGGAAAGCCAATGATCATCCAGTTTGGTCGAAATCCCGCCTCTGCCAAGACAACTTAA 1410 0.4348 MACNPSLHGNMHQHQFPLQSTESTPCDAESAVPVTLLIKHLPEAIPNDTLSRILANFGASSVRPCSSGRLRNCAFADFKNEMVASQAQRQLNGLRFLGKVLSAERASNPTENSEKSSSDQLKDSKTSMLKNANVIKPIDGDKKSGGLPIPEPIADRLGVNYPFPPQLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEVPAPPPPPPTVTVNPHSTDLSSGESEMESSDEEGEARTKKRVRREAIVGPAIDKGVAHESVGVKSATLVPKEIPVIKKNHVLKINIVPKATLNEHKDEETAQELLEPEKDVPDPNKFFTPDELEKGKLPPEQILSLPMFKNYTAGNPAPVLYIKNLAKDVIADDFYFIFGELSRLLLDSGSLFGSIEAAKSGLQVKLMQEGRMRGQAFITFPSIELAHHALNLVNGYVLKGKPMIIQFGRNPASAKTT 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1038 469 MobiDBLite consensus disorder prediction 8 24 - -
Aed9g1038 469 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 415 454 IPR000504 GO:0003723
Aed9g1038 469 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 101 IPR000504 GO:0003723
Aed9g1038 469 PANTHER UNCHARACTERIZED 26 468 IPR045164 -
Aed9g1038 469 MobiDBLite consensus disorder prediction 105 129 - -
Aed9g1038 469 MobiDBLite consensus disorder prediction 218 234 - -
Aed9g1038 469 CDD RRM2_RBM40_like 371 460 - -
Aed9g1038 469 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 108 IPR000504 GO:0003723
Aed9g1038 469 MobiDBLite consensus disorder prediction 1 24 - -
Aed9g1038 469 Gene3D - 365 468 IPR012677 -
Aed9g1038 469 SMART rrm1_1 371 458 IPR000504 GO:0003723
Aed9g1038 469 SMART rrm1_1 35 104 IPR000504 GO:0003723
Aed9g1038 469 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 370 462 IPR000504 GO:0003723
Aed9g1038 469 SUPERFAMILY RNA-binding domain, RBD 35 462 IPR035979 GO:0003676
Aed9g1038 469 PANTHER RNA-BINDING REGION-CONTAINING PROTEIN 3 26 468 - -
Aed9g1038 469 CDD RRM1_RBM40_like 35 106 IPR034147 GO:0005515
Aed9g1038 469 Gene3D - 29 135 IPR012677 -
Aed9g1038 469 MobiDBLite consensus disorder prediction 218 262 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1038 K13157 - gmx:100814307 764.607