Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1031 ATGGTTTCTACTTCAGAATCACTGTCTCAATCTCAACCGCTTCATGACCGAGTCGCAATCGTCACTGGCTCGTCCCGCGGAATCGGTCGAGAAATCGCGCTTCACCTCGCCTCACTCGGCGCGCGAATGGTAGTCAACTACACCTCCAACTCAGCTCAAGCCGACTCAGTAGTAGCCCAAATCAACGCCAACTCCTCCGCCACGCCGCGCGCCGTGGCAGTCCAAGCTGACGTGTCCGATCCGGTCCAGGTGAAATCGCTCTTCGACTCAGCCGAACGCACCTTCGACTCACCGGTCCACATCCTGGTCAACTCGGCCGGCGTCAGCGACGAAACATACTCCACCATCGCCAACGCGACCGTGGAGTCCTTCGACCGCATCTTCGCGGTGAACGCGCGCGGCGCGTTTGCGTGCGCCAGGGAGGCGGCGAACCGCCTGAAGCGAGGCGGCGGAGGGAGGATTATTCTGGTGTCGACGTCGCTGGTGGCGGCGCTGAGGCCAGGGTACGGGGCGTACACGGCGTCGAAGGCGGCGGTGGAGGCGATGACGAAGATCCTGGCGAAGGAGCTGAAGGGAACGAAGATAACGGCGAACTGCGTGGCGCCGGGACCTATCGCGACGGAGCTGTTCTTCGAGGGGAAGACGGAGGAGACAGTGAATAGGATGGTGCAAGAGAGTCCCTTGGGGAGGCTCGGTGAGACCAAAGACGTGGCACCCGTTGTGGGATTCTTGGCCACTGATGCTTCTGAATGGGTCAACGGTCAAATCATTCGTGTCAATGGTGGCTTTGTTTAG 795 0.605 MVSTSESLSQSQPLHDRVAIVTGSSRGIGREIALHLASLGARMVVNYTSNSAQADSVVAQINANSSATPRAVAVQADVSDPVQVKSLFDSAERTFDSPVHILVNSAGVSDETYSTIANATVESFDRIFAVNARGAFACAREAANRLKRGGGGRIILVSTSLVAALRPGYGAYTASKAAVEAMTKILAKELKGTKITANCVAPGPIATELFFEGKTEETVNRMVQESPLGRLGETKDVAPVVGFLATDASEWVNGQIIRVNGGFV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1031 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 IPR002347 -
Aed9g1031 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 IPR002347 -
Aed9g1031 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 IPR002347 -
Aed9g1031 264 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 1 264 - -
Aed9g1031 264 Gene3D - 2 264 - -
Aed9g1031 264 PRINTS Glucose/ribitol dehydrogenase family signature 172 191 IPR002347 -
Aed9g1031 264 PRINTS Glucose/ribitol dehydrogenase family signature 227 247 IPR002347 -
Aed9g1031 264 PRINTS Glucose/ribitol dehydrogenase family signature 193 210 IPR002347 -
Aed9g1031 264 PRINTS Glucose/ribitol dehydrogenase family signature 146 162 IPR002347 -
Aed9g1031 264 PRINTS Glucose/ribitol dehydrogenase family signature 97 108 IPR002347 -
Aed9g1031 264 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Aed9g1031 264 CDD THN_reductase-like_SDR_c 17 264 - -
Aed9g1031 264 Pfam Enoyl-(Acyl carrier protein) reductase 23 263 - -
Aed9g1031 264 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 17 208 - -
Aed9g1031 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 263 IPR036291 -
Aed9g1031 264 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1031 Aed-Chr9 7449339 7450133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1031 12 263 Acyl Lipid Metabolism Gene Families AT1G24360 30.435 3.02e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1031 K00059 - gmx:100809416 429.869