Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1029 ATGGCAATTGCACGCACTGGAGTCTACGTAGACGACTATTTGGAGTACGCGAGCACATTACCCGCTGAGCTTCAGAGACTGCTTAACACTGTCCGCGAACTCGATGATCGATCCCAATCTATGATAACCCAGACTAGGCAGCAGACAAAGTACTGTATGGGGTTCTCATCACATGGTCCTAAGAAGGGTAATCACAGTTATAATAACAGTTATGGGAATGAGGATGACGATGCCGCTATTGAGAAAATGCGAAAAGATATCGAGGCAAATCAGGATAGTGCTTTGAGTCTATGTACTGAGAAGGTTTTGCTGGCGCGACAAGCATATGAACTGATAGATAGCCATGTAAAACGACTTGATGAGGATTTACACAACTTTGCTGAAGATTTAAAGCAAGAGGGTAAAATACCCCCAGATGAACCAGCAATTCTGCCACCATTGCCTATAGTCCCTAAGCCTGAAAAGCGCAAGCCCATATATATAACTCCTCAATCAAAGAGAATTGAGTACAGGGAAAGAGATTGGGACAGGGAGCGCGATAGGGACTTCGAGCTAATGCCTCCTCCAGGAAGTCATAAGAAGGAGTATGCTACCCCGATGGATGTTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTCGGAGATATGATTGCTTGTGACAATGAAAATTGCCAAGGAGGTGAATGGTTCCACTATTCATGTGTTGGGCTAACGCAAGAAACAAGGTTCAAGGGAAAGTGGTACTGTCCGACTTGCATATTACTCCCCCAAATGCAACGATGA 807 0.4436 MAIARTGVYVDDYLEYASTLPAELQRLLNTVRELDDRSQSMITQTRQQTKYCMGFSSHGPKKGNHSYNNSYGNEDDDAAIEKMRKDIEANQDSALSLCTEKVLLARQAYELIDSHVKRLDEDLHNFAEDLKQEGKIPPDEPAILPPLPIVPKPEKRKPIYITPQSKRIEYRERDWDRERDRDFELMPPPGSHKKEYATPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGKWYCPTCILLPQMQR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1029 268 ProSiteProfiles Zinc finger PHD-type profile. 211 263 IPR019787 -
Aed9g1029 268 PANTHER INHIBITOR OF GROWTH PROTEIN 2 263 IPR028651 -
Aed9g1029 268 SMART ING_2 9 126 IPR024610 -
Aed9g1029 268 SMART PHD_3 213 261 IPR001965 -
Aed9g1029 268 SUPERFAMILY FYVE/PHD zinc finger 188 261 IPR011011 -
Aed9g1029 268 Gene3D - 5 123 - -
Aed9g1029 268 PANTHER PHD FINGER PROTEIN ING2 2 263 - -
Aed9g1029 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 262 IPR013083 -
Aed9g1029 268 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 126 IPR024610 -
Aed9g1029 268 CDD ING_plant 17 123 - -
Aed9g1029 268 CDD PHD_ING 213 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1029 Aed-Chr9 7439314 7443260 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1029 K11346 - gmx:100787916 524.242