Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1009 ATGGCGAGCGATCCGAGACAGAGCGAAGCCCAAGTGGCGCTAATCCTGGGCTCGGATTCGGCCCACCTGGAATCCCTAATCTCTCAATTGATGTCTTCTTCGAACGAGCAGCGGTCTCAGGCGGAGGCCGTCTTCAACCTCTGCAAGCAGGCCCGACCGGAGTCCCTCCTGCTCGGCCTGGCCCACCTCCTCCACTCCTCCCCCAACCCCGAGACCCGTACCATGTCCGCCATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACGCCTTCCTCTGGCCCCTCCTCTCGGCCCAGGCCCGCTCCTCCCTCCACTCCCTCCTCCTCTCCTCCCTCCACCAGGAGCCAGTCAAATCCATCACGAAGAAGCTCTGCGACACCGTCTCCGAACTCGCCGCCGCCACGCTCCCCGAAGACGCCTCGGCGTGGCCCGACCTTCTCCCTCTTCTCTTCCAGTGGGTCACCTCCCCCGACCCGAGGCTCCAGGAAATCTCTCTTCTCATATTCGCTCAATTGGCTCACTACATCGGCCAAACCCTACTTCCTCAATTATCCACTCTTCACTCTGTTTTCCTCCGCTCCCTTCACTCCTCCACCCCCTCCGACGTCCGCATCGCCGCCCTCGCCGCCGCCGTCAACTTCATCCAATGCCTCACCAGCCCCTCCGACCGCGACCGCTTCCAGGACCTCCTCCCTCTCATGATGCAGACCCTCACCGAGGCCCTCAACTCCGGCCAGGAGGCCGTTGCGCAGGAGGCCCTCGAGCTCCTCATCGAGCTCGCCGGCACCGAGCCGCGCTTCCTCCGCCGCCAAATCGTCGACGTCGTCGGCGCCATGCTGCAGGTCGCGGAAGCCGACGCCTTGGAGGAAGGAACCAGACACTTGGCAATTGAGTTTGTCGTTACCCTCGCCGAGGCTAGGGAACGCGCCCCTGGAATGATGAGGAAGCTGCCTCAGTTTGTGAGGAAGCTTTTTGAAGTGTTGATGAATCTGTTGCTTGATGTTGAGGATGATCCTGCGTGGCACGGTGCAGAGGATGAGGATGAGGACGCCGGTGAGACGAGTAACTATGGGTTTGGACAGGAGTGTTTGGATAGGCTCTCGATTTCTCTTGGTGGGAACACCATTGTGCCAGTTGCTTCTGAGTTGTTGCCCGGCTTCCTGGCTGCTCTTGAGTGGGAGAAGCACCATGCTGCTCTCATTGCACTTGCACAAATCGCGGAGGGTTGTTCGAAGGTGATGATCAAGAATCTGGAGCAGGTATTGTCGATGATTTTAAATTCATTTCGTGATCCCCACCCTCGAGTACGATGGGCTGCCATAAATGCAATTGGGCAATTGTCCACGGATTTGGGACCAGACTTGCAGGTTAAATTTCACCACTTAGTGCTGCCGGCTTTGGCTGGAGCCATGGATGATTTTCAAAATCCAAGAGTACAGGCTCATGCTGCTTCTGCAGTGCTAAATTTCACTGAGAATTGTACCCCAGATATTCTAACACCCTACTTAGATGGGATTGTGAGCAAACTTTTGGTACTCCTGCAGAATGGAAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCCTTAGCATCAGTTGCAGATTCGTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCGTATTTGAAAGCTATTCTGGTAAATGCAAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAATCTCAACTGGATGCCGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTTTGCTCCAGTCTGCACAACTTAAGCCTGATGTGACCATTACATCAGCGGATTCTGATACTGAATTTGATGATGATGATGACAGCATCGAAACAATCACACTTGGGGATAAAAGGATAGGCATCAAGACTAGTGTCTTGGAGGAGAAGGCTACTGCTTGTAACATGCTATGTTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCCATGCCGGAACTGTTGTCCTCGGCAAAATTAGCTCTGGAGAAGGGACAATCGCAAGGTCGTGATGAGACTTACATTAAACAGTTGTCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTGGAAATTTGTGCAAGCATGTTGGACGCATTGAATGAATGCATACAGGTCTCTGGATCACATCTAGTAGATGAAAAGCAAGTACGAAGCATTGTTGATGAGATTAAACAAGTTCTTACGGCCAGTTCGTCAAGAAAGCATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAAATACTCAAGGAAGAAAATGAGCAAGAAGAGGAACTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGGCATCTTTCTTGCCTTTCTTTGAGGAGCTGTCCTCATACCTAACACCTATGTTTGGTAAAGACAAAACCTCAGAGGAAAGGAGAATTGCTATTTGTGTATTTGATGATGTTGCTGAGCACTGTCGTGAAGCTGCTCTTAAATATTATGATTCTTATCTTCCATTCTTACTTGAAGCTTGCAATGATGAATATCCAGACGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGGTTAGATGCTGTGATAAGGCATCCGAATGCACAACATTCTGATAACGTAATGGCATATGACAATGCCGTTTCAGCTGTTGGAAAAATATGCCAATTCCATCGTGATAGCATAAATGCAGCACAGGTTGTTCCTGCCTGGCTAAGTTGCTTGCCTATAAAAGGCGATTTAATTGAAGCTAAGGTTGTGCATGACCAACTTTGTTCAATGGTTGAAAGATCGGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCCAAAATTGTTGCAGTTTTTGCCGAGATTTTGTGTGTGGGAAATGATCTGGCAACCGAACAAACTGTGAGTCGGATGGTTAATTTATTGAGGCAACTTCAACAAACTTTACCACCTTCTACCCTTGCTTCAACATGGTCATCTTTGCAGCCTCAGCAGCAGCTTGCACTTCAGTCCATCCTATCAGCCTAG 3357 0.4936 MASDPRQSEAQVALILGSDSAHLESLISQLMSSSNEQRSQAEAVFNLCKQARPESLLLGLAHLLHSSPNPETRTMSAILLRRHLTRHHDAFLWPLLSAQARSSLHSLLLSSLHQEPVKSITKKLCDTVSELAAATLPEDASAWPDLLPLLFQWVTSPDPRLQEISLLIFAQLAHYIGQTLLPQLSTLHSVFLRSLHSSTPSDVRIAALAAAVNFIQCLTSPSDRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIVDVVGAMLQVAEADALEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFEVLMNLLLDVEDDPAWHGAEDEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPGFLAALEWEKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFRDPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDDDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKLALEKGQSQGRDETYIKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGSHLVDEKQVRSIVDEIKQVLTASSSRKHERAERAKEEDFDAEEREILKEENEQEEELFDQVGDCLGTLIKTFRASFLPFFEELSSYLTPMFGKDKTSEERRIAICVFDDVAEHCREAALKYYDSYLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDAVIRHPNAQHSDNVMAYDNAVSAVGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCVGNDLATEQTVSRMVNLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSA 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1009 1118 Pfam Interferon-related developmental regulator (IFRD) 490 626 IPR007701 -
Aed9g1009 1118 ProSiteProfiles HEAT repeat profile. 421 459 IPR021133 -
Aed9g1009 1118 SMART TOG_3 370 611 IPR034085 -
Aed9g1009 1118 Pfam Importin repeat 6 786 890 IPR041389 -
Aed9g1009 1118 SUPERFAMILY ARM repeat 22 957 IPR016024 -
Aed9g1009 1118 PANTHER BNAC09G37860D PROTEIN 12 1117 - -
Aed9g1009 1118 Pfam HEAT repeats 388 486 - -
Aed9g1009 1118 Coils Coil 833 853 - -
Aed9g1009 1118 Pfam Importin repeat 287 378 IPR041653 -
Aed9g1009 1118 Gene3D - 18 1117 IPR011989 -
Aed9g1009 1118 PANTHER IMPORTIN BETA 12 1117 IPR040122 GO:0006606
Aed9g1009 1118 Pfam HEAT repeat 927 954 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1009 Aed-Chr9 7263000 7272387 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1009 K20222 - gmx:100797431 1970.67