Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1003 ATGAACTACATGGACCCTAAACTGTCAATTGATACCCGGGTTGAGGATCTTGTTAGCAGGATGACTCTTGAGGAGAAAATTGGTCAAATGTTGCAGGTTGAGCGCAAGTTTGCATCTGCTGATTTGCTTAAGAAGTATTTTATTGGGAGTGTGATGAGTGAGGGAGGGAGTCTTCCGGCTCCACAGGCTTCTGCTGAGGCCTGGATTGACATGGTGAATGAATTTCAGAAGGGTGCCTTATCATCCCGCCTTGGAATTCCAATGGACCCTGAACTAGTTAAGAGAATTGGAGCTGCAACTGCTCTTGAAGTTAGAGCAACAGGAATTCAATATGTTTATTCACCTTGTATAGCAGTGTGTAGGGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATCCTGAACTAGTTCAAGCTATGACTGAAATCATACCAGGATTGCAAGGGGACATCCCTGATAATTTACCAAAGGGTGTCCCTTTTATCACTGGAAAAGAAAAAGTTATAGGTTGTGCTAAGCACTTCGTGGGTGATGGTGGAACAATCAATGGGATTGATGCGCACGACACTGTTATAAATAGAGATGAATTGATGAAAATTCATATGCAAGCCTACTTCAACTCAATCAGCAAGGGTGTGGCATCCATTATGGTCTCTTACTCCAGTTGGAATGGAGTAAAAATGCATACTCACCATGACCTTATTACTGGCTACCTCAAGAATAGTCTCCATTTCAAGGGCTTTGTAATTTCAGATTATGAGGGTATTGATAGGATCAGCTCTCCACCTCGTTCAAACATCACTCATTCAATTGAAGCAGGAGTTTCTGCAGGCATTGACATGTTCATGATTCCAAGGCATTACACAGAATTCATAGATGTTCTAACCATGTTGGTGGAAAATAAGAACATTCCCATGAGTCGAATTGATGATGCGGTGAGAAGAGTTTTGTGGGTTAAGTTCATGATGGGTCTTTTTGAGAACCCTTTTGCTGATTACAGTTTGGTCAAATATTTGGGAATCCAGGAACACAGAAATTTGGCCAGGGAAGCAGTAAGGAAATCAATGGTCCTTCTGAAAAATGGTGAATCTGCTGACAAGCCTCTATTGCCTCTTCCTAAAAAGGCACAAAAAATACTCGTGGCTGGTAGCCATGCTGATAATCTAGGATATCAGTGTGGTGGTTGGACCATAGAATGGCAAGGAGTCAGTGGAAACAATCTTCTCGAAGGGACTACAATTCTCAATGCTGTGAAAAACACTGTTGATCCTGATACCGAAGTGGTCTACAAGGAGAACCCTGATGCAGAATTTGTCAAATCCAATGAATTTTCTTATGCCATAGTTGTAGTAGGAGAGCATCCATATGCTGAAATGCATGGTGACAACATGAACCTGACAATCCCGGACCCTGGTCTTGAGACCATAACAAATGTGTGTGGAGCAACAAAATGTGTGGTTGTCATAATTTCTGGTCGTCCTTTAGTGATTGAACCATATGTTGATTCAATAGATGCAGTTGTGGCTGCATGGCTCCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTATTTGGTGACTATAGTTTCACAGGAAAGCTTCCAAGGACATGGTTCAAAACTGTTGATCAACTTCCAATGAATGTTGGCGATCCTCACTATGATCCCCTCTTCCCATTTGGCTTTGGCCTTTCTACCAAACCTTCCAAGGCCCTTTATTCCTCGTAG 1734 0.4262 MNYMDPKLSIDTRVEDLVSRMTLEEKIGQMLQVERKFASADLLKKYFIGSVMSEGGSLPAPQASAEAWIDMVNEFQKGALSSRLGIPMDPELVKRIGAATALEVRATGIQYVYSPCIAVCRDPRWGRCYESYSEDPELVQAMTEIIPGLQGDIPDNLPKGVPFITGKEKVIGCAKHFVGDGGTINGIDAHDTVINRDELMKIHMQAYFNSISKGVASIMVSYSSWNGVKMHTHHDLITGYLKNSLHFKGFVISDYEGIDRISSPPRSNITHSIEAGVSAGIDMFMIPRHYTEFIDVLTMLVENKNIPMSRIDDAVRRVLWVKFMMGLFENPFADYSLVKYLGIQEHRNLAREAVRKSMVLLKNGESADKPLLPLPKKAQKILVAGSHADNLGYQCGGWTIEWQGVSGNNLLEGTTILNAVKNTVDPDTEVVYKENPDAEFVKSNEFSYAIVVVGEHPYAEMHGDNMNLTIPDPGLETITNVCGATKCVVVIISGRPLVIEPYVDSIDAVVAAWLPGSEGQGVADVLFGDYSFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGLSTKPSKALYSS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1003 577 Pfam Glycosyl hydrolase family 3 N terminal domain 84 319 IPR001764 GO:0004553|GO:0005975
Aed9g1003 577 PRINTS Glycosyl hydrolase family 3 signature 124 140 IPR001764 GO:0004553|GO:0005975
Aed9g1003 577 PRINTS Glycosyl hydrolase family 3 signature 170 186 IPR001764 GO:0004553|GO:0005975
Aed9g1003 577 PRINTS Glycosyl hydrolase family 3 signature 240 258 IPR001764 GO:0004553|GO:0005975
Aed9g1003 577 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 89 577 - -
Aed9g1003 577 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 1 88 - -
Aed9g1003 577 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 89 577 - -
Aed9g1003 577 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 88 - -
Aed9g1003 577 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 358 567 IPR036881 GO:0004553|GO:0005975
Aed9g1003 577 Pfam Glycosyl hydrolase family 3 C-terminal domain 358 567 IPR002772 GO:0004553|GO:0005975
Aed9g1003 577 SUPERFAMILY (Trans)glycosidases 2 357 IPR017853 -
Aed9g1003 577 Gene3D - 343 569 IPR036881 GO:0004553|GO:0005975
Aed9g1003 577 Gene3D - 1 88 IPR036962 GO:0004553|GO:0005975
Aed9g1003 577 Gene3D - 89 342 IPR036962 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1003 Aed-Chr9 7211264 7215963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1003 1 572 Glycoside Hydrolase AT5G20950 65.225 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1003 K05349 - gmx:100816705 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1003 9 7211264 7215963 Aed9g1003 9 7211264 7215963 ECH