Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0315 ATGCTAGAGGCAATGGAAAGTTCGGTCAATGGTGGGTTCTCACATTTGCAGAGCTGCGGAGACAGCAGCGAGGAAGAGTTATCGGTGCTTCCACGTCACACCAAAGTGGTCGTAACCGGAAATAACCGCACCAAATCGGTTCTCGTTGGTCTTCAAGGTGTTGTTAAGAAAGCCGTTGGACTTGGCGGATGGCATTGGCTGTTCTGGGTATCCATTGCATGTCTTTCTTCATTGCTGGATCTGGTGTTTTATGAGGTTCTCACAAATGGTATTGAAGTGAAGCTACAGAGGAATGCTCTCAGTGTGATTGAAGCACCCACTGGTAATGAGGAAGATGATGACCTTGAATTTGAAAATATGCCGTGGAATGGATCAGATATGGCATCGGACGACACACAGAAGTCCCACAAGTCGAGGCATAGAATGCATAGAACATTGGGATCATCTCACAAGACCATGAGTAGGTCCTTCTCCGGTGATTCACAGTCGAAGGGGTCCGTTACTATGCCTCATGGGTCCACGAAGGTCGACTTGGGCAAACTTGAAATGGCTGCATTGTGGAGATACTGGCGACATTTTAATCTAGTGGATGCGGTCCCAAACCCAAACCCATCAAAAGAGCAGCTAGTAGACGTTGTTCAGAGGCATTTCATGTCGCAGCAAATGGACGAATTGCAGGTGATTGTGGGATTTGTCCAAGCTGCAAAGAGGCTTAAGACTGTATGCAAATGA 732 0.4727 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLFWVSIACLSSLLDLVFYEVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSQSKGSVTMPHGSTKVDLGKLEMAALWRYWRHFNLVDAVPNPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVCK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0315 243 PANTHER SAP30 1 243 IPR024145 -
Aed9g0315 243 MobiDBLite consensus disorder prediction 149 170 - -
Aed9g0315 243 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 181 236 IPR025718 GO:0005515
Aed9g0315 243 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 243 - -
Aed9g0315 243 MobiDBLite consensus disorder prediction 124 172 - -
Aed9g0315 243 Gene3D - 156 243 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0315 Aed-Chr9 2211365 2216312 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0315 - - gmx:100809195 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0315 9 2211365 2216312 Aed9g0315 9 2211365 2216312 ECH