LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g0302	ATGGCATCCTCCGGTCTCATCTCCGACACCCAGCCATGGAAGGACCTTGAGCAGGCACATGTGGAGGACATAAAGAAAACACATCTTCGCGATCTATTGAGCGATGATAATCGGTGTCAGTCCATGCTCGTTGACTTCGATGACATTCTGCTGGACTATTCAAGGCAACAAGCCACTCCCGAAACTATCCAGAAGCTCTTTCAATTAGCGGAGGCTGCATCGCTCAAAGAAAAGATTAACCGCATGTACAGCGGGGATCATATAAACAGCACCGAGGATAGGTCAGTGCTTCATGTTGCTCTTCGTGCTTCAAGGAACGCTGTCATACAGAGTGATGGGAAGAATGTTGTCCCCGAAGTTTGGGAAGTTCTTGACAAGATTAAGGAGTTCTCTGAGCGGGTTCGCAATGGTTCTTGGGTTGGTGCTACAGGGAAGGCTTTGAAGGACGTTGTTGCAGTTGGTATTGGGGGAAGTTTCTTAGGTCCGCTGTTTGTACACACTGCACTTCAAACAGACTCTGAAGCTGTTGAATCTGCAAGGGGTCGTCAGCTGCGCTTTCTTGCAAATGTTGATCCTATTGACGTGGCAAGAAATATCACAGGATTAAATCCTGAAACAACACTTGTTGTGGTTGTTTCAAAGACTTTTACAACAGCTGAAACTATGCTGAATGCTCGAACTCTTAGAGAATGGATTTCATCTGCACTTGGGGCCTCTGCAGTTGCAAAGCATATGGTGGCTGTTAGCACAAATCTCACGCTTGTGGAAAAGTTTGGTATTGATCCTAATAATGCTTTTGCATTTTGGGACTGGGTTGGTGGTCGGTATAGTGTTTGCAGCGCTGTTGGAGTTTTGCCATTATCTCTACAATATGGTTTTTCTGTAACAGAGAAGTTCTTAAGGGGGGCTTCAAGCATTGATCAACATTTCTATTCACAGCCATTTGAAAGCAATATACCTGTGCTTCTAGGTTTGTTGAGCGTATGGAATGTTTCATTTCTTGGATATCCTGCCAGAGTTAGCATGGAGAGTAATGGCAAGGGTGTTTCAATTGATGGCATCCCTCTACCATTTGAGGCTGGTGAAATTGATTTTGGTGAACCAGGAACTAATGGGCAGCATAGCTTTTATCAGCTCATACATCAGGGGCGTGTAATTCCTTGTGATTTTATTGGAGTTGTGAAAAGTCAGCAACCTGTCTTTCTGAAAGGTGAAGTGGTGAGTAACCATGATGAGCTAATGTCCAACTATTTTGCACAGTCTGATGCCCTTGCATATGGGAAGACAGCAGAGCAGCTGCAAAAGGAGAATGTTTCCCCACACCTTATTCCTCACAAGGTAATATTCACTCTTCACTGCAACTTGCAGATTAATAGTTGA	1380	0.4442	MASSGLISDTQPWKDLEQAHVEDIKKTHLRDLLSDDNRCQSMLVDFDDILLDYSRQQATPETIQKLFQLAEAASLKEKINRMYSGDHINSTEDRSVLHVALRASRNAVIQSDGKNVVPEVWEVLDKIKEFSERVRNGSWVGATGKALKDVVAVGIGGSFLGPLFVHTALQTDSEAVESARGRQLRFLANVDPIDVARNITGLNPETTLVVVVSKTFTTAETMLNARTLREWISSALGASAVAKHMVAVSTNLTLVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVTEKFLRGASSIDQHFYSQPFESNIPVLLGLLSVWNVSFLGYPARVSMESNGKGVSIDGIPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVFLKGEVVSNHDELMSNYFAQSDALAYGKTAEQLQKENVSPHLIPHKVIFTLHCNLQINS	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g0302	459	CDD	SIS_PGI_1	121	289	IPR035476	-
	Aed9g0302	459	Hamap	Glucose-6-phosphate isomerase [pgi].	46	459	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aed9g0302	459	CDD	SIS_PGI_2	342	426	IPR035482	-
	Aed9g0302	459	Pfam	Phosphoglucose isomerase	52	339	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aed9g0302	459	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	7	448	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aed9g0302	459	PRINTS	Glucose-6-phosphate isomerase signature	150	169	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aed9g0302	459	PRINTS	Glucose-6-phosphate isomerase signature	266	284	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aed9g0302	459	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	10	459	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Aed9g0302	459	Gene3D	-	18	447	-	-
	Aed9g0302	459	ProSitePatterns	Phosphoglucose isomerase signature 1.	270	283	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Aed9g0302	459	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	7	448	-	-
	Aed9g0302	459	Gene3D	-	143	275	-	-
	Aed9g0302	459	SUPERFAMILY	SIS domain	8	447	IPR046348	GO:0097367\|GO:1901135

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g0302	Aed-Chr9	2104227	2112921	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed9g0302	K01810		-	gmx:100807719	828.55

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed9g0302	9	2104227	2112921	Aed9g0302	9	2104227	2112921	ECH