Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0299 ATGGCGGCGGAGATACCGTGCTGTGGAACCAAGTTTTCACTGTACGTGTTGATGATCATAGGTTTGGTTTGCTTCGCAGGCCTTATGGCTGGTCTCACTCTCGGACTCATGTCTTTGGGACTCGTCGACCTCGAAGTTCTCATGAAATCTGGTCGTCCTCAGGATCGCATCCACGCTGCGAAAATTTATCCAGTGGTTAAGAACCAGCATCTTCTGCTTTGCACGCTTTTAATTGGAAACTCCCTAGCTATGGAGGCTCTTCCCATTTTTCTGGATTCCCTGGTGCATCCAGCTGCGGCAATCTTGATTTCGGTCACACTCATCCTCATGTTTGGAGAGGTTCTTGATTGGATGTTGGGTAAAGGACATGCTGCCCTTTTGAAGAGGGCAGAGCTCAAGACTTTTGTGAATTTTCATGGAAATGAGGCTGGTAAAGGAGGAGATTTAACTCACGACGAGACAACCATCATAACTGGTGCACTTGAATTGACAGAAAAAACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCAATAATGACAATTGGTCATAGTAGAGTTCCAGTTTATGCAGGAGAAAAAACCAATATTATTGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTTCTCTAAGAAAAATGCTCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTCTATGATATACTGAACGAATTTCAGAAGGGTCACAGTCATATTGCAGTTGTGTATAGGGATCTAAATGATAAAAACGAAGCCCCAAAAAAGGTTAAAGATGGGGAAAAACTTGATCTTAAGGACAACCGTAGGAATAAGAGAGAGAACACATCCTTGGATAAAGGTTCGAAAATGGAGTCACATGATTCTTTGACTACTGATGGTGCTCAGCAAGCAAAGAAAAGTCCACCAGCAACTCCTGCTTTTAAAAAGCGACATCGAGGTTGTTCACATTGCATCCTGGACCTTGATAATGCTCCCCTACCAGTGTTTCCACCCAATGAAGTGGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGTTAGATGCTTTAATGCTTTATACTTAGAATTAGTAGTTTGGGCTCCAAATTATTCAGTCATGATAAAAGTTAACATGAATGCTTCTAAGGAGAAGGCTCCTGATGCAAATCTATTGCAGCCTTCTCAAGCAGTTCAAGGACACACACCAACTAATTCAATTTCTACAGCTACTTCTGCAACAGGCTCACCTACAACAATTGATCTAATCTCCGAAAGTGAGTCACTAAGGAATCAATAG 1365 0.4176 MAAEIPCCGTKFSLYVLMIIGLVCFAGLMAGLTLGLMSLGLVDLEVLMKSGRPQDRIHAAKIYPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVHPAAAILISVTLILMFGEVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTIGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVSLRKMLIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKNEAPKKVKDGEKLDLKDNRRNKRENTSLDKGSKMESHDSLTTDGAQQAKKSPPATPAFKKRHRGCSHCILDLDNAPLPVFPPNEVVVGVITMEDVIEELLQVRCFNALYLELVVWAPNYSVMIKVNMNASKEKAPDANLLQPSQAVQGHTPTNSISTATSATGSPTTIDLISESESLRNQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0299 454 Pfam Cyclin M transmembrane N-terminal domain 18 115 IPR002550 -
Aed9g0299 454 Gene3D - 151 284 IPR046342 -
Aed9g0299 454 CDD CBS_pair_CorC_HlyC_assoc 167 268 IPR044751 -
Aed9g0299 454 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 114 436 - -
Aed9g0299 454 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 115 - -
Aed9g0299 454 SUPERFAMILY CBS-domain pair 157 374 IPR046342 -
Aed9g0299 454 ProSiteProfiles CNNM transmembrane domain profile. 8 115 IPR002550 -
Aed9g0299 454 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 115 IPR045095 GO:0010960
Aed9g0299 454 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 114 436 IPR045095 GO:0010960
Aed9g0299 454 MobiDBLite consensus disorder prediction 277 311 - -
Aed9g0299 454 MobiDBLite consensus disorder prediction 418 454 - -
Aed9g0299 454 MobiDBLite consensus disorder prediction 277 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0299 Aed-Chr9 2086450 2090783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0299 K16302 - gmx:100527789 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0299 9 2086450 2090783 Aed9g0299 9 2086450 2090783 ECH