Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed9g0290 | ATGCTAGGAGTCTACCGTTTACTGCGACTTCGCCAAAATCCTCAAAGGGGCGCAATATTTCAACAATTCCAAGGGAATGGAATCCTTAACCTAAACAAAATATATTCAAATTTTAGAATTGTCAAGTCGTATCCACCCATGCAGCAGAAAGGATTGGAGAATGTCACAGTGTCAGAGGTACTAATGACAAAAGAGGAAGAAAATGTTGGTTCCTGGCTTTGGTGCCGAGCTGATGATGCTGTTATTAATGCAATGAAGAACATGGCTGATAATAACATTGGATCATTGATGGTACTAAAGCCAGAGGGGGAGCACATAGCAGGCATTGTCACAGAAAGAGACTGCTTGAGAAAAATAGTTGCAAAAGGAAAATCTCCCTTACACACACAAGTTGGTCAAATAATGACTGATGAGGTTATTTTATGCTCTCTTTTTCCATTTTACTTATCAGCCAAATCTTGCATTTTCATTGTGAATAATACTACTGAGGTTACTTGTGAACAGAATAACCTGATAGCGGTGACCTCTGACACCAACATTCTTCAAGCAATGAAAATTATGACAGAAAATCATATCAGGCATGTTCCGGTTATAGATGGGAAAATAGTTGGTATGATTTCAATTGTAGATGTGGTGCGAGCAGTGATGGAGCAGCAAAGTGGAGAATTGAAGCGACTAAATGACTACATCCGAGGAGAATACTTTTAG | 708 | 0.3912 | MLGVYRLLRLRQNPQRGAIFQQFQGNGILNLNKIYSNFRIVKSYPPMQQKGLENVTVSEVLMTKEEENVGSWLWCRADDAVINAMKNMADNNIGSLMVLKPEGEHIAGIVTERDCLRKIVAKGKSPLHTQVGQIMTDEVILCSLFPFYLSAKSCIFIVNNTTEVTCEQNNLIAVTSDTNILQAMKIMTENHIRHVPVIDGKIVGMISIVDVVRAVMEQQSGELKRLNDYIRGEYF | 235 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed9g0290 | 235 | CDD | CBS_pair_bac_euk | 75 | 213 | IPR044725 | - | |
| Aed9g0290 | 235 | PANTHER | CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN | 162 | 234 | - | - | |
| Aed9g0290 | 235 | PANTHER | CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN | 1 | 142 | - | - | |
| Aed9g0290 | 235 | SMART | cbs_1 | 170 | 216 | IPR000644 | - | |
| Aed9g0290 | 235 | SMART | cbs_1 | 71 | 120 | IPR000644 | - | |
| Aed9g0290 | 235 | Gene3D | - | 50 | 145 | IPR046342 | - | |
| Aed9g0290 | 235 | Gene3D | - | 160 | 234 | IPR046342 | - | |
| Aed9g0290 | 235 | SUPERFAMILY | CBS-domain pair | 53 | 231 | IPR046342 | - | |
| Aed9g0290 | 235 | Pfam | CBS domain | 170 | 216 | IPR000644 | - | |
| Aed9g0290 | 235 | Pfam | CBS domain | 57 | 120 | IPR000644 | - | |
| Aed9g0290 | 235 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL | 162 | 234 | - | - | |
| Aed9g0290 | 235 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL | 1 | 142 | - | - | |
| Aed9g0290 | 235 | ProSiteProfiles | CBS domain profile. | 166 | 223 | IPR000644 | - | |
| Aed9g0290 | 235 | ProSiteProfiles | CBS domain profile. | 62 | 127 | IPR000644 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed9g0290 | Aed-Chr9 | 2046824 | 2047831 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed9g0290 | - | - | gmx:100778020 | 357.066 |
Event-related genes