Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0264 ATGGCTATCAACAACAACAAGCTTGTTCTGTTAACATTCGCCATATGCCGTTTAATAGTAACGGTGGTCCCGGAGCTGCTCGATGTGGGACTGGAGGCGGCCTCGGTGGACTTCGGGAGGCTGAGCAGAGCGGAGCCATCGGAGGTGGTGCACCCAGGCACGGCGGAGGACGTGGCAAGGGTGGTGAAGGCGGCGTTGGAGTCAGGGTTCGCGGTGTCAGCAAGGGGACACGGGCATTCGATAAACGGGCAAGCCCTGATAAAAGAGAAGATGAAAGGGGTGGTGATTGAAATGGGTAGCGGTAGCATTCAAGTGTGCGAGAAAGGAATGTATGTGGACGTGTGGGGTGGGGAGCTGTGGATAGATGTATTGAGTGCAACATTGGAGTATGGGCTAGCTCCCAAGTCTTGGACCGATTACTTGTATTTGTCTGTGGGTGGAACCCTATCCAACGCTGGAATTAGTGGACAAACCTTCAATCACGGTCCTCAGATCACCAATGTTTTTCAGCTCGATGTCGTTACAGGAAAGGGTGAGGTGGTGACATGTTCAGAAGATCGTAACTCGGAGTTGTTCCATGCTGTTCTAGGCGGTCTTGGACAATTTGGAATCATCACAAGGGCTAGAATTGCTCTCGAACCAGCCCCTCACAGAGTTCGGTGGATACGAGTACTGTATTCGAATTTTGCAACGTTTAGCAAGGACCAAGAGTATCTGATATCTCTGCATGGAAATGGAAGGGAGAGATTCGATTATGTGGAGGGTTTCGTGATAGTTGATGAAGGGTTGATAAATAATTGGAGGTCATCGTTCTTTACTCCTAGTAATCCTGTTAAAATCACTTCCCTCAACGCTGACGGATCAGGTGTTCTCTACTGCTTGGAGATTACCAAAAATTACAACCAAGATTCTGTTGACGAGGAAATAGAAGCTCTATTGGAAAAGTTAAATTTTATACCAGCATCGGTTTTTACAACGGACTTGCCTTACGTGGATTTTCTGGATCGTGTACATAAGGCAGAGCTGAAGCTTAGATCCAAAGGATTATGGGATGTACCTCATCCATGGCTCAACCTTTTTGTTCCAAAATCAAGGATAGGGGATTTCGACAAGGGTGTCTTCAAGGGCATTCTTGGAAATAACACAAGTGGCCCTATCCTCATCTACCCTATGAACAAAAACAAGTAA 1188 0.4722 MAINNNKLVLLTFAICRLIVTVVPELLDVGLEAASVDFGRLSRAEPSEVVHPGTAEDVARVVKAALESGFAVSARGHGHSINGQALIKEKMKGVVIEMGSGSIQVCEKGMYVDVWGGELWIDVLSATLEYGLAPKSWTDYLYLSVGGTLSNAGISGQTFNHGPQITNVFQLDVVTGKGEVVTCSEDRNSELFHAVLGGLGQFGIITRARIALEPAPHRVRWIRVLYSNFATFSKDQEYLISLHGNGRERFDYVEGFVIVDEGLINNWRSSFFTPSNPVKITSLNADGSGVLYCLEITKNYNQDSVDEEIEALLEKLNFIPASVFTTDLPYVDFLDRVHKAELKLRSKGLWDVPHPWLNLFVPKSRIGDFDKGVFKGILGNNTSGPILIYPMNKNK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0264 395 PANTHER GULONOLACTONE OXIDASE 30 395 - -
Aed9g0264 395 SUPERFAMILY FAD-binding/transporter-associated domain-like 31 214 IPR036318 GO:0050660
Aed9g0264 395 Gene3D - 34 97 IPR016167 -
Aed9g0264 395 Gene3D - 98 217 IPR016169 -
Aed9g0264 395 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 46 79 IPR006093 GO:0016491
Aed9g0264 395 Pfam FAD binding domain 46 184 IPR006094 GO:0050660
Aed9g0264 395 ProSiteProfiles PCMH-type FAD-binding domain profile. 42 215 IPR016166 GO:0071949
Aed9g0264 395 PANTHER CYTOKININ OXIDASE 5-RELATED 30 395 - -
Aed9g0264 395 SUPERFAMILY FAD-linked oxidases, C-terminal domain 216 395 IPR016164 GO:0003824|GO:0050660
Aed9g0264 395 Gene3D - 219 395 IPR016170 -
Aed9g0264 395 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 216 395 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0264 Aed-Chr9 1896125 1898649 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0264 K00279 - gmx:100790584 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0264 9 1896125 1898649 Aed9g0264 9 1896125 1898649 ECH