Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0259 ATGGACCTCGATCCTCGTCAATACGAAAACCTTGCTATAAATGATAATGACATCCACAACATTGTTCTGTCATATCTTATACATAATTGCTACAAAGAATCGGTAGAATCATTCATTGCCTGCACCGGGACAAAGCAACCTGCAGATTATTTGGAGGACATGGACAAAAGGAAAAGAATCTTTCATTTTGCACTAGAAGGAAATGCACTCAAGGCTATTGAGCTTACTGAACAGCTGGCAAAGGATATTCTAGAGAACAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTTGTTGAGCTTGTCTGCTCAAGGAAATGCACAGAAGCTTTGGAATTTGCTCAGACCAAACTGGGCCCTTTCGGAAAGGAGCCCAAGTATATGGAAAAGCTCGAAGACTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAGAAATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAACAGGTTGCAGATAGTTTGAATCGAGCTATTCTTGGTTGCACACTTGAATCTTCCCAGTTACACAGCAATGGAGAGGCTAATACAGCAGGCTACAGTTGTAAGACAGTGCTTAAGTCAGGAAGCTGGCAAGGATGGGACTCCATTTTCCTTAAAGGATTTTCTCAAAAGTTGATGGAAAACGGTAAAAAAATGGAGAGTCAATTGGGGAATGAAGCTCGTTTACCTTGA 705 0.4128 MDLDPRQYENLAINDNDIHNIVLSYLIHNCYKESVESFIACTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAKDILENNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILGCTLESSQLHSNGEANTAGYSCKTVLKSGSWQGWDSIFLKGFSQKLMENGKKMESQLGNEARLP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0259 234 Pfam CTLH/CRA C-terminal to LisH motif domain 54 172 IPR024964 -
Aed9g0259 234 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 175 - -
Aed9g0259 234 SMART ctlh 53 110 IPR006595 -
Aed9g0259 234 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Aed9g0259 234 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Aed9g0259 234 SMART toby_final6 106 196 IPR013144 -
Aed9g0259 234 PANTHER RAN BINDING PROTEIN 9-RELATED 8 175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0259 K23338 - gmx:100801338 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0259 9 1864312 1868336 Aed9g0259 9 1864312 1868336 ECH