Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0231 AACAACAACCCAGCATCAAGTCCAGGTTCAGACGCATCTGTGTCTACTGTGGTAGCAGCCCTGGCAAAAGCCCCAGCTACCAGCTTGCTGCTATTCAACTCGGAAAACAACTGGCAAGTGGAGAGAGACATTGACTTGGTATATGGAGGAGGAAGCATCGGGTTGATGGGTCTAATCTCCCAAGTTGTGTATGATGGTGGACGCCACGTGTTAGGGGTCATTCCAAAGACACTTAATGCAAGAGAGATCACTGGAGAGAGTGTAGGAGAAGTGAGAGCTGTATCGGGGATGCACCAACGCAAGGCCGAAATGGCTCGACAAGCCGATGCTTTTATTGCACTGCCAGGTGGATATGGCACCCTCGAAGAACTATTGGAAATTATCACCTGGGCTCAACTAGGTATCCATGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCAGCTGCCCGTCACATTATTGTTTCTGCCCACACTGCCCAAGACCTCATGTGCAAGCTTGAGGAATATGTCCCCGAGCACTGTAGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACACTTAGTTAACACTGCAAAGTCAGATATTTCCCGTTGA 657 0.5008 NNNPASSPGSDASVSTVVAALAKAPATSLLLFNSENNWQVERDIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLNAREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAHTAQDLMCKLEEYVPEHCSVAPKLSWEMEQHLVNTAKSDISR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0231 218 SUPERFAMILY MCP/YpsA-like 40 189 - -
Aed9g0231 218 Pfam Possible lysine decarboxylase 56 185 IPR031100 -
Aed9g0231 218 Gene3D - 5 188 - -
Aed9g0231 218 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 39 207 - -
Aed9g0231 218 PANTHER LOG FAMILY PROTEIN YJL055W 39 207 - -
Aed9g0231 218 TIGRFAM TIGR00730: TIGR00730 family protein 41 189 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0231 Aed-Chr9 1624567 1626485 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0231 K22522 - gmx:100782787 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0231 9 1624567 1626485 Aed9g0231 9 1624567 1626485 ECH