Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0210 ATGCAGCAAGGAGACTACACCTCCGCTCCATATTATCAATTCCCTCATCTCCAAAACCCCAATCCCAATCCAAATCCCGATCCACACCCAAACAACCCCTACGCTTCTGCACCTCCCTTCACCCCCAATTACGCCCCTTCAGATTACACCCCTTACCCTCATCAAATTCCCGATCCTATTCCACCCACTGCTCCTTTCAATCCACCCTTCGAATCAAACCCAAACCCTAACCGTAACCCTCCCTACCAACAACACCAACACCCACAACAACAACCCTATTTCCCACCCTATGATCAGCATCAGATGCCTCCCAATTACGCCTCTCCCAACCCACCCAATTCCGCTCCCTCCGCATACAACTCTGCTCCCTACAGCTACACCGGACCCTCCTCCGTTCCTCCAATTCCGACATACGAGCCTGCGTACGAGCCTCCGGTGAGGCCCGATCAAAGCGGAGGCTACTTTGACGACAGGTACGGAGGCCCCGGATTTACCCGGAGCCACTCTGATTTGGGATCCGATTATTTCGGGAAGAGCGGCGCTGCTGCTTCGAGATATGACGGTGGCGGCGGCGACGATGGTTACGGAGACGGAGTGTATGCGTATGAAGGGGGCAAGGTGGAACCCTACGGGGCGCGTGGCACAGCGCCCAAATCGTCTACTTGGGGCGCGTTTGATGATTACGGGAGGACCATCAGTTTCCCCTCGCAAAAGGTACCTTCTGTGGCGGCTAAGATTGTGAAAGCGGTGCCCAAGGCTGATACACAAGAAGACGTCAGAGGTGGTGGCGTTCAAAAGTTTCGTGTCAAGCTCTTGGCCGAAAGTGGGGGTCAGAGCACCATGGATGTTCTCTGTCAGATTGGTTTGGATGGAATTCGAATGCTGGATCCAAATACTAGCCGTACATTGAGAATTTATCCTCTTGAGAACATAACAAGATGTGATAGAGTTGAATCATCTACCTTTGCATTTTGGTCAAAGAGCCCTGTGGACATTGAGCCAAGACGGATCAGATTGCAATCTAATAGTTACACTACCAACACACTTTTGGATATAGTGACTGCTGCAACCATACAGTTCAAGGAAATGGGTGGAAGCAGGAGGCCTGTTGAATCTGTGAAAACAAATGAACAACCTACAGAAAGAAAGAAAGGTTTTGGTGATTGGATGAATCTTATTAAGCCTCCCAATGAAGAGAAGGATCATTGGGTACCAGATGAAGCTGTCTCAAAATGTACAGCATGCGGCTCTGATTTTGGGGCTTTTGTTCGCAGGCATCACTGTAGGAACTGTGGTGATATTTTCTGTGACAAATGTACACATGGTAGAATTGCTTTGACTGCCGATGAGAATGCTCAGCCTGTACGAGTTTGTGACCGGTGCATGGCAGAAGTGACTCAGCGGCTGACTAGTGCTAAAGAGTCATCAAGTAAACCTGCTTTGCAGAGTCATGAGGATCTTGCGAGGAAACTTCAGGAGGAACTGGAGAGAAATCGAAAGACATCAGAAGTGGTGTGGTTTGTAGGTTCCAAGTCTGATGGATCTTCAAGACGGATGAAGGAAGTTGCATGTCCTATTTGCACTGTCCATCTGCAGGTTCAGGTGCCTAGCTCGGGTTCAGAGACAATTGAGTGTGGAGTTTGCCAGCACCCATTTCTTGTGAGTGCTCATTGA 1674 0.4964 MQQGDYTSAPYYQFPHLQNPNPNPNPDPHPNNPYASAPPFTPNYAPSDYTPYPHQIPDPIPPTAPFNPPFESNPNPNRNPPYQQHQHPQQQPYFPPYDQHQMPPNYASPNPPNSAPSAYNSAPYSYTGPSSVPPIPTYEPAYEPPVRPDQSGGYFDDRYGGPGFTRSHSDLGSDYFGKSGAAASRYDGGGGDDGYGDGVYAYEGGKVEPYGARGTAPKSSTWGAFDDYGRTISFPSQKVPSVAAKIVKAVPKADTQEDVRGGGVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLDPNTSRTLRIYPLENITRCDRVESSTFAFWSKSPVDIEPRRIRLQSNSYTTNTLLDIVTAATIQFKEMGGSRRPVESVKTNEQPTERKKGFGDWMNLIKPPNEEKDHWVPDEAVSKCTACGSDFGAFVRRHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLTSAKESSSKPALQSHEDLARKLQEELERNRKTSEVVWFVGSKSDGSSRRMKEVACPICTVHLQVQVPSSGSETIECGVCQHPFLVSAH 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0210 557 MobiDBLite consensus disorder prediction 129 143 - -
Aed9g0210 557 PANTHER PROTEIN FREE1 1 557 - -
Aed9g0210 557 SMART fyve_4 398 467 IPR000306 GO:0046872
Aed9g0210 557 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 406 466 IPR017455 -
Aed9g0210 557 MobiDBLite consensus disorder prediction 112 128 - -
Aed9g0210 557 MobiDBLite consensus disorder prediction 77 96 - -
Aed9g0210 557 MobiDBLite consensus disorder prediction 1 16 - -
Aed9g0210 557 PRINTS Proline rich extensin signature 39 55 - -
Aed9g0210 557 PRINTS Proline rich extensin signature 83 104 - -
Aed9g0210 557 PRINTS Proline rich extensin signature 18 30 - -
Aed9g0210 557 PRINTS Proline rich extensin signature 65 77 - -
Aed9g0210 557 PRINTS Proline rich extensin signature 132 149 - -
Aed9g0210 557 PRINTS Proline rich extensin signature 105 121 - -
Aed9g0210 557 MobiDBLite consensus disorder prediction 17 76 - -
Aed9g0210 557 Coils Coil 481 501 - -
Aed9g0210 557 CDD PTB 268 324 - -
Aed9g0210 557 MobiDBLite consensus disorder prediction 1 173 - -
Aed9g0210 557 SUPERFAMILY PH domain-like 268 329 - -
Aed9g0210 557 CDD FYVE_EEA1 403 465 - -
Aed9g0210 557 PANTHER PROTEIN FREE1 1 557 IPR045893 GO:0036258|GO:0043130
Aed9g0210 557 SUPERFAMILY FYVE/PHD zinc finger 401 473 IPR011011 -
Aed9g0210 557 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 393 471 IPR013083 -
Aed9g0210 557 Pfam FYVE zinc finger 402 466 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0210 Aed-Chr9 1489551 1494036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0210 384 467 EF-hand Containing Proteins AT3G14270 33.673 2.07e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0210 - - gmx:100794840 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0210 9 1489551 1494036 Aed9g0210 9 1489551 1494036 ECH