Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0177 ATGATAGTGGAGGAAGTGGTGGAAGTAAAGGTGAGTGGTAGAGCGAGAGAGAGTGAAAGTGAGAAGAGCTCAACTCCATCACGTTTTATGACCACTACTCCTTTAGCCAGCCCGATGAAGAAGGCGATTGAAAACATGCAAGGTTACTTTGGAGAAGTTGGTCGCTTCACCAAGCTCGATCCGCAAGACGATTGGCTTCCCATCACCCAGTCAAGGAAGGGTAACGCTTACTACGCTGCGTTTCATGTTCTTTCTTCAGGCATTGGATTTCAGGCTTTTGTTCTTCCATTAGCCTTCACCACTCTTCGCTGGACATGGGGAATCCTATGTCTCTGTGTGGCTTTTACCTGGCAGCTCTACACCTTGTGGTTACTCATTCAGCTTCACGAATCGGACTCAGGGCTGCGCCATAGCAGGTACCTCAGACTTGCTATGGCAGCATTCGGAGAAAAGATAGGAAAACTACTAACACTCTTCCCAATCATGTATTTATCGGGTGGAACATGTGTGACATTGATCATGATCGGAGGTGGCACAATGAAGATATTTTTTGAGATGGTGTTTGGAACAACCCCACTCACAAGCATTGAATGGTATTTGGCGTTTACATGCACTGCCATTTTGCTTGCCCAGTTGCCCAACCTTAATTCAATCGCAGGGGTTTCCCTCATCGGAGCCATCACTGCTGTAAGTTACTGTGCTCTTATATGTATTGTATCTGTAGTCAAAGGTAGACTTCATCATGTATCCTATGACTATGACCCACCAAGGGGACATTCGGAGATAATTTTTAGCGCGTGGAATGCACTTGGTATCATTGCTTTTGCTTTTCGCGGTCACAATCTTGTGTTGGAAATACAGGGAACCATGCCTTCGGATGCTAAGCAACCCTCACGCTTAGCCATGTGGAAAGGTGTTATGTTTGCTTACATAGTCATCGCCTTGTGTTTGTTTCCCCTTGCCATTGGAGGTTATTGGGCCTATGGAAATTTAATACCTACCAATGGAGGGATGTTAGGTGCTTTGCAAAAATACCACGAACATGATACATCAAAATTTATCATTGCTCTGACAAGCTTGCTAGTTGTTATAAACAGCATCAGTTCCTTCCAAATCTATGCAATGCCAGTATTTGACAATCTGGAATTCAGATACACTAGCAAGATGAACAGACCTTGCCCGAGGTGGCTACGAATAGCCTTCAGGGGTCTCTTCGGCTGCCTAGCATTTTTTATTGCTGTAGCCTTACCATTCTTACCAAGTTTGGCAGGTCTCATTGGAGGCGTTGCTCTACCAATAACCTTAGCATATCCCTGTTTCATGTGGATACAGATTAAGAAGCCACAGAAATGTAGCATAAACTGGTACTTTAACTGGACACTAGGCGTTGTTGGGATGATTCTAAGTGTACTGGTTGTCATAGGAGCCATTTGGGGCATTGTTGCTCAGGGCATAGAGATCCATTTCTTCAATCCACAGTAG 1482 0.4474 MIVEEVVEVKVSGRARESESEKSSTPSRFMTTTPLASPMKKAIENMQGYFGEVGRFTKLDPQDDWLPITQSRKGNAYYAAFHVLSSGIGFQAFVLPLAFTTLRWTWGILCLCVAFTWQLYTLWLLIQLHESDSGLRHSRYLRLAMAAFGEKIGKLLTLFPIMYLSGGTCVTLIMIGGGTMKIFFEMVFGTTPLTSIEWYLAFTCTAILLAQLPNLNSIAGVSLIGAITAVSYCALICIVSVVKGRLHHVSYDYDPPRGHSEIIFSAWNALGIIAFAFRGHNLVLEIQGTMPSDAKQPSRLAMWKGVMFAYIVIALCLFPLAIGGYWAYGNLIPTNGGMLGALQKYHEHDTSKFIIALTSLLVVINSISSFQIYAMPVFDNLEFRYTSKMNRPCPRWLRIAFRGLFGCLAFFIAVALPFLPSLAGLIGGVALPITLAYPCFMWIQIKKPQKCSINWYFNWTLGVVGMILSVLVVIGAIWGIVAQGIEIHFFNPQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0177 493 PANTHER OS05G0424000 PROTEIN-RELATED 52 487 - -
Aed9g0177 493 Pfam Transmembrane amino acid transporter protein 73 481 IPR013057 -
Aed9g0177 493 PANTHER OSJNBA0084K11.20 PROTEIN 52 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0177 Aed-Chr9 1265166 1269224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0177 12 492 Organic Solute Cotransporters AT1G47670 55.533 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0177 - - gmx:100788860 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0177 9 1265166 1269224 Aed9g0177 9 1265166 1269224 ECH