Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0169 ATGCAAGCTGCATCTTCAGGCATCGGATACGGTCTAAAATATCAGGCTAGATGCATATCCGATGTAAAAGCAGACACAGATCACACTAGCTTCCTTGCTGGCACTCTCAGTCTCAAAGAAGAAAATGAGGTACATCTGATTCGGCTTTCGTCGAGTGGAACCGAACTCTTCTGCGAGGGATTGTTCTCTCATCCCAACGAGATCTGGGACCTTGTCTCGTGTCCCTTTGATCAACGGATATTTTCAACCGTCTACTCTAACGGTGAAACGTATGGGGCAGCGATATGGCAGATCCCCGAGTTATATGGCGAGTTAAATTCCCCTCAGCTAGAGAGAATTACCTCCCTTGACACTGATTCCGGCAAAATTAAATGTATTCTTTGGTGGCCATCTGGGAGGCATGATAAATTGATCAGCATCAATGAGGAAAACCTGTACTTGTGGAATTTAGATGTTTCAAAGAAAACTGCACAGGTACAATCGCAAGATTCAGCTGGTATGCTGCACAAGTTATCTGGAGGGGCATGGGATCCACATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCGAATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGACTATGTCAATCGACTGTTCCCATGTATGCAGTGTTGATTATCATCCCCAAAAGCAGCACATACTTGTTACTGCAGAACATGAGTCCGGGATACACATTTGGGATCTAAGAAAACCTAAAGTTCCCATCCAAGAGCTTCCAGGACATACTCATTGGACATGGACTGTCAAGTGTAACCCAGAGTATGATGGAATGATCTTGAGTGCTGGTACGGATTCAACTGTCAACTTGTGGCTTGCTTCAACAAATCATGATGAGTTAACGACTGAAAGCAGACAAGCAGATTCATCTGCCCAATGGGTTGATCCATTGCTTAATACTTACAGTGATTATGAAGACAGCATTTATGGGCTCACATGGAGTTCTCGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTAGAATCAGTTAAGCCTTTCACCTCCAAAAAATGA 1056 0.4366 MQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLERITSLDTDSGKIKCILWWPSGRHDKLISINEENLYLWNLDVSKKTAQVQSQDSAGMLHKLSGGAWDPHDVSSVAATCESNLQFWDVRTMKKTMSIDCSHVCSVDYHPQKQHILVTAEHESGIHIWDLRKPKVPIQELPGHTHWTWTVKCNPEYDGMILSAGTDSTVNLWLASTNHDELTTESRQADSSAQWVDPLLNTYSDYEDSIYGLTWSSREPWIFASLSYDGRVVVESVKPFTSKK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0169 351 SUPERFAMILY WD40 repeat-like 18 341 IPR036322 GO:0005515
Aed9g0169 351 Gene3D - 13 348 IPR015943 GO:0005515
Aed9g0169 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 280 IPR001680 GO:0005515
Aed9g0169 351 PANTHER WD-REPEAT PROTEIN 1 350 IPR040323 -
Aed9g0169 351 PANTHER WD REPEAT-CONTAINING PROTEIN DWA2 1 350 - -
Aed9g0169 351 SMART WD40_4 303 343 IPR001680 GO:0005515
Aed9g0169 351 SMART WD40_4 55 97 IPR001680 GO:0005515
Aed9g0169 351 SMART WD40_4 109 149 IPR001680 GO:0005515
Aed9g0169 351 SMART WD40_4 241 281 IPR001680 GO:0005515
Aed9g0169 351 SMART WD40_4 199 237 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0169 K23289 - gmx:100779030 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0169 9 1221175 1226306 Aed9g0169 9 1221175 1226306 ECH