Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0154 ATGTTAGAAAAAGAAAAGGGGGAGGAGAGAAATAGAATAGAGAGAAGGTGTTTGTTTGTTTGGGGAGCGAGAAAAGAGGAGGAAACAATGGGCGAGGTATCTGAAACGATGATGACGAAGAGGAAGAAGAAGGGACGCCCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAAAAAGAACACCACCAGCGACAACAAAACAACCCCAATTACAACAACAACAACAGCAACAACAAAAACGTTGACGACGACGAGGACGAGCGCAAGGAGAAGAAGCACAAGCTCTTGGTCGGTCTCAATTCCCATCTCCACCACCCAACATTATTGCCCATTTCCCAACCCTTCAATTCCGATCCCAAGAGACGCAAGATTCTTGACCCTCTCCAAATCCAAACGGATGAGAAGGTTCCGAAAGCGACTGACAGCAGTAAACATGGTTCGCAGGGTGAGTCCGGTCCCACTACGCCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGGCTTCAAAAAAAGGACACACATGGGGTATTCTCTGAGCCTGTGGATCCAGAAGAGCTTCCTGATTATCACGACATCATTAAACACCCCATGGATTTTGGAACTGTGAGGAAGAAATTGGATGGGGGACTATATACTGACTTGGAACATTTTGAGAAAGATGTGTTCTTGATATGCTCTAATGCAATGCAATATAACTCCTCAGATACCATTTACCATCGACAGGCCCGAGCCATGCAAGAGATTGCAAGGAAGGACTTTGAGAATCTGAGACAAGATAGTGATGATAGTGAACCACAGCCCAAAATTGTGCAGAGAGGAAGGCCACCGGGCAAGCACTCAAGAAAGTCACTGGGTATGCCTCCTTCTGAGCGTGTTGGTCCCGAATCTTCTTCTGATGCAACCCTTGCTTCTGGTGGGGATATTGCTAGTGGTTCCAATGGCTATAATCTAAGGAAAGCACTCAGCAAATTTCAGCCCACAGATTCACCTGCCAGGGCCTACAACAGCACTTTTAACAGTGGAGGGTATACTGGCTCGTCCGAATGGGAGAATGAATTTCCAGCTTCTGTTGTAAAAGCCGTGTTAAGATATGGAAAGAAGCAGTTTGCAGTTGATGAGACCAGGCGTGATACTTACAAAAATCCAGTGACTTTAGGAAATGAACGACCAGTGTTGACCACAGTTGAAGATGAATTTAAGCAACTTCTTGCAGTAGGTGTACACATGAAGCATAGCTATGCAAGAAGTCTAGCCCATTTTGCTGCAGATCTTGGTCCTGTTGTTTGGAAGATTGCTGCAAGTAAAATCAGCAGTGTTTTGCCAACAGGACATGAATTTGGTCCTGGATGGGTAAGTGAAGACGAAGGGTCATCACAGAGGCAACAGTTCCCAGTTTGCGATGAGGGTAGAACTTCAGACCCTCCTGTACCCGAGGATTATAGAAGTAGATTTTCTTCTCCATCTGGATCGTACCCCCTTGCAAATAGATCATGCTTGCAAAGTGGAGACATGGTTATAAATAATTACCAAAATGAGTTGAATTCAGTAATCAACATTCCTGGTGGGTCTGAGTCTTCCATAACTCCTATGAGGATTCAGCAGGAATCCATGGCACACACTGACGACTTTGGTTCACATGGCCGGTTAGGTTCTAATTTTCCATCTCAAATGAAGATGGTAAGACTTGCTGATCTAACTGGGGGGTCTCCGAGTTCTGGGGCTGTTCCTCAAATGTTTGACATGGATCCCATAAGCCGCAGCAGCAGCAGCCACATTGCGCATATAAATATTAATCCTTCTCTTAAGGGTCAGTACTTAAGCAAATCAAGTCAATCAGATTCCGGTAATTTATTGGCACGGGAACCTGGATTTGAGCCACGAAGTTGGTCTCAAGGGCTTGCTGGAAAATCATCTTGGCAGGGATTGGAAGTTCCCACTAAACAAAATTCTTTTGCACTTGCTACTAATGACTTACACGGAAGGATTGGAACTACAAATTCACCTAGTTCCAACGTGGAAGCTGGTTCTCAGTTGCAGCCCAATTTGGCATTACAGCTCTGA 2067 0.4504 MLEKEKGEERNRIERRCLFVWGARKEEETMGEVSETMMTKRKKKGRPSLLDLQKRSLKKEHHQRQQNNPNYNNNNSNNKNVDDDEDERKEKKHKLLVGLNSHLHHPTLLPISQPFNSDPKRRKILDPLQIQTDEKVPKATDSSKHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTVRKKLDGGLYTDLEHFEKDVFLICSNAMQYNSSDTIYHRQARAMQEIARKDFENLRQDSDDSEPQPKIVQRGRPPGKHSRKSLGMPPSERVGPESSSDATLASGGDIASGSNGYNLRKALSKFQPTDSPARAYNSTFNSGGYTGSSEWENEFPASVVKAVLRYGKKQFAVDETRRDTYKNPVTLGNERPVLTTVEDEFKQLLAVGVHMKHSYARSLAHFAADLGPVVWKIAASKISSVLPTGHEFGPGWVSEDEGSSQRQQFPVCDEGRTSDPPVPEDYRSRFSSPSGSYPLANRSCLQSGDMVINNYQNELNSVINIPGGSESSITPMRIQQESMAHTDDFGSHGRLGSNFPSQMKMVRLADLTGGSPSSGAVPQMFDMDPISRSSSSHIAHININPSLKGQYLSKSSQSDSGNLLAREPGFEPRSWSQGLAGKSSWQGLEVPTKQNSFALATNDLHGRIGTTNSPSSNVEAGSQLQPNLALQL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0154 688 ProSiteProfiles Bromodomain profile. 171 241 IPR001487 GO:0005515
Aed9g0154 688 MobiDBLite consensus disorder prediction 79 97 - -
Aed9g0154 688 PANTHER BROMODOMAIN CONTAINING PROTEIN 36 504 - -
Aed9g0154 688 SMART bromo_6 152 260 IPR001487 GO:0005515
Aed9g0154 688 Pfam Bromodomain 166 245 IPR001487 GO:0005515
Aed9g0154 688 MobiDBLite consensus disorder prediction 28 158 - -
Aed9g0154 688 MobiDBLite consensus disorder prediction 258 311 - -
Aed9g0154 688 MobiDBLite consensus disorder prediction 608 634 - -
Aed9g0154 688 MobiDBLite consensus disorder prediction 296 311 - -
Aed9g0154 688 CDD Bromodomain 159 255 - -
Aed9g0154 688 Gene3D - 157 274 IPR036427 GO:0005515
Aed9g0154 688 MobiDBLite consensus disorder prediction 28 65 - -
Aed9g0154 688 MobiDBLite consensus disorder prediction 449 490 - -
Aed9g0154 688 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 36 504 - -
Aed9g0154 688 ProSitePatterns Bromodomain signature. 176 233 IPR018359 -
Aed9g0154 688 SUPERFAMILY Bromodomain 141 263 IPR036427 GO:0005515
Aed9g0154 688 MobiDBLite consensus disorder prediction 665 688 - -
Aed9g0154 688 PRINTS Bromodomain signature 222 241 IPR001487 GO:0005515
Aed9g0154 688 PRINTS Bromodomain signature 204 222 IPR001487 GO:0005515
Aed9g0154 688 PRINTS Bromodomain signature 188 204 IPR001487 GO:0005515
Aed9g0154 688 PRINTS Bromodomain signature 174 187 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0154 Aed-Chr9 1085163 1093476 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0154 K22184 - gmx:100811115 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0154 9 1085163 1093476 Aed9g0154 9 1085163 1093476 ECH