Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0144 ATGGCCACTCACGCTGCTCTAGCTTCTACAAGGATCCCCACAAACACCAGAAACTTCCCATCCAAGGCCTCTCACTCTTTCCCAACCCAATGCGCCTCAAAGAGACTTGAGGTGACAGAATTCTCTGGGCTAAGATCCACTTCATGTGTAACATATGCTAACAATGCCAGAGATTCTTCCTTTTTTGATCTTGTAGCCTCCCAACTCACTCCCAAGAGCAATGGATCAAGTGCTGTGAGGGGAGAGACAGTGGCGAAGTTGAAGGTGGCAATCAATGGTTTCGGACGCATTGGTAGGAACTTCCTTCGCTGCTGGCACGGGCGAAAAGACTCACCCCTTGAAGTCATTGTTGTCAATGACAGCGGTGGTGTCAAGAATGCTTCGCACCTGTTGAAATATGATTCAATGCTGGGAACATTTAAAGCAGATGTGAAAATACTAGACAATGAAACCATCACTGTGGATGGTAAGCCCATCAAGGTTGTTTCAAACAGGGACCCTAGTAAGCTTCCTTGGGCTGAGCTTGGAATTGACATTGTTATTGAGGGAACGGGAGTGTTTGTGGATGGCCCTGGGGCTGGCAAACACATCCAAGCAGGTGCCAAGAAAGTTATTATCACTGCTCCTGCAAAGGGTGCTGACATTCCAACTTATGTTGTTGGAGTCAACGAAGGGGGCTACACTCATGAAATCGCTAACATTATAAGCAACGCTTCCTGCACCACAAACTGTCTTGCTCCCTTTGTCAAGATCCTGGATGAAGAGTTTGCACTGAACATTGTCCCAACCAGCACTGGAGCTGCGAAGGCAGTGTCTCTGGTGCTGCCAAATCTGAAGGGGAAGCTGAACGGAATTGCGCTACGTGTGCCTACACCGAATGTTTCAGTTGTTGACCTTGTGATCAATGTTGAGAAGAAGGGTCTGAGTGCTGAAGATGTGAATGCAGCATTCAGAAAGGCAGCTGAGGGACCACTCAAAGGTGTATTGGACGTCTGTGATGTTCCACTTGTGTCTGTCGACTTCCGTTGCTCTGATGTTTCTTCTACAATCGACTCCTCCTTGACTATGGTCATGGGAGATGATATGGTTAAGGTGGTTGCTTGGTATGACAATGAATGGGGTTACAGCCAAAGAGTGGTGGATTTGGCACATCTAGTAGCAAGCAAGTGGCCAGGGACACCAAAAGCGGGGAGCGGAGACCCATTGGAGGAATTCTGCGAGACAAACCCTGCTGATGAAGAATGCAAAGTTTATGAATGA 1260 0.4786 MATHAALASTRIPTNTRNFPSKASHSFPTQCASKRLEVTEFSGLRSTSCVTYANNARDSSFFDLVASQLTPKSNGSSAVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKILDNETITVDGKPIKVVSNRDPSKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGGYTHEIANIISNASCTTNCLAPFVKILDEEFALNIVPTSTGAAKAVSLVLPNLKGKLNGIALRVPTPNVSVVDLVINVEKKGLSAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGTPKAGSGDPLEEFCETNPADEECKVYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0144 419 MobiDBLite consensus disorder prediction 1 25 - -
Aed9g0144 419 Gene3D - 372 383 - -
Aed9g0144 419 SMART gp_dh_n_7 87 240 IPR020828 GO:0051287
Aed9g0144 419 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 257 419 - -
Aed9g0144 419 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 257 419 IPR020831 GO:0016620
Aed9g0144 419 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 1 257 IPR020831 GO:0016620
Aed9g0144 419 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 257 IPR036291 -
Aed9g0144 419 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 257 369 IPR020829 GO:0016620
Aed9g0144 419 Gene3D Dihydrodipicolinate Reductase; domain 2 258 371 - -
Aed9g0144 419 MobiDBLite consensus disorder prediction 8 25 - -
Aed9g0144 419 Gene3D - 86 257 - -
Aed9g0144 419 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 234 252 IPR020831 GO:0016620
Aed9g0144 419 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 196 209 IPR020831 GO:0016620
Aed9g0144 419 Pfam CP12 domain 398 419 - -
Aed9g0144 419 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 238 245 IPR020830 GO:0016620
Aed9g0144 419 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 240 370 - -
Aed9g0144 419 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 88 189 IPR020828 GO:0051287
Aed9g0144 419 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0144 Aed-Chr9 1014419 1017193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0144 K05298 - gmx:732571 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0144 9 1014419 1017193 Aed9g0144 9 1014419 1017193 ECH