LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g0136	ATGAAAGGTGCCGTCCTCGTCGCTATTGCCGCTTCCATCGGCAATTTTCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCGATTGTTTACATAAAGAAAGACCTTGCGCTGCAGACAACAATGGAAGGGCTAGTGGTGGCGATGTCCCTGATTGGGGCAACGGTAATCACAACATGCTCTGGTCCAATATCAGATTGGCTTGGGAGGCGACCGATGTTGATAATCTCATCAGTGCTGTATATATTGGGGAGTTTGGTGATGCTGTGGTCACCGAATGTGTATGTGCTGTGCTTAGCGAGGCTGCTTGATGGATTCGGGATTGGGCTGGCAGTCACTCTCGTCCCGGTATACATATCCGAAACGGCACCGTCTGAAATAAGAGGGTCGTTGAATACGCTTCCTCAGTTCAGCGGCTCTGGAGGCATGTTTTTGTCTTATTGTATGGTATTTGGGATGTCATTGAGTCCCGCGCCTAGCTGGAGGCTCATGCTTGGACTTCTCTCTATTCCTTCCCTCTTCTATTTTGCATTGACCATCTTTTTCTTGCCCGAGTCTCCTCGCTGGCTCGTCAGCAAAGGAAAGATGCTCGAGGCTAAAAAGGTTCTCCAAAGATTACGCGGAAGGGAGGATGTCTCAGGCGAGATGGCATTGCTGGTTGAAGGTCTGGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATCGGGCCTGCTGACGAGGTGGGTGATGGTCAGGACCACGCCGCAACAGACAAAGATAAAATTCGGTTATATGGATCCCAAGCAGGGCTGTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCGTCGCGCCATGGAAGCATCATCAACCAGAGCATGCCACTCATGGATCCTCTTGTCACACTGTTTGGTAGCATTCATGAGAAGCTCCCTGAGACAGGAGCAGGAGGAAGCATGCGAAGTGCGCTGTTTCCAACTTTTGGAAGCATGTTCAGCACGGCTGAGCCGCATGTTAAACATGAACAGTGGGATGAGGAGAGCTTACAAAGGGAGGGTGAGGACTCCATGTCAGATGGAGCTGGTGGGGACTCTGATGATAATTTGCACAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACTTACCTCCTCCTCCTCCTTCCCATGGCAGTATCCTGGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGATCAGCAAGGTGGTAGTACAGGCATTGGTGGTGGCTGGCAGCTGGCATGGAAATGGACTGATAAAGGTGAGGATGGAAAAAAGGAAGGAGGGTTCAAAAGGATTTATTTACACGAGGAGGGAGTTGGTGCATCTCGCCGTGGATCTCTTGTGTCAATTCCTGGTGAAGGTGATTTTGTACAGGCTGCTGCATTGGTAAGCCAACCTGCTCTTTACTCTAAGGAGCTTATTGATGGACAACCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACAGCTTCAAAGGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTTGGAGTCGGAATACAAATACTTCAGCAGTTTTCGGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCCGGTGTGGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCGTCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCGTGTATAGCTGTAGCAATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGCTGATTGTGACACTGGTTATTTTGGTGATTGGAAGCCTAGTGGATTTTGGCAATGTTGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTTTGCTTCTTTGTGATGGGTTACGGACCAATTCCAAACATCCTTTGCTCAGAGATATTCCCAACAAGGGTGCGTGGCCTCTGCATTGCTATCTGTGCGTTAGTGTTCTGGATTGGAGACATCATAATCACATACTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGCTGGTGTCTTCGCCATTTATGCAGTTGTTCCAGAAACAAAGGGAATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAGGCAGGCTGCTACTGCCAAGAACGAGTGA	2187	0.4865	MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALQTTMEGLVVAMSLIGATVITTCSGPISDWLGRRPMLIISSVLYILGSLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSPAPSWRLMLGLLSIPSLFYFALTIFFLPESPRWLVSKGKMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPADEVGDGQDHAATDKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPLVTLFGSIHEKLPETGAGGSMRSALFPTFGSMFSTAEPHVKHEQWDEESLQREGEDSMSDGAGGDSDDNLHSPLISRQTTSLEKDLPPPPPSHGSILGSMRRHSSLMQGSGDQQGGSTGIGGGWQLAWKWTDKGEDGKKEGGFKRIYLHEEGVGASRRGSLVSIPGEGDFVQAAALVSQPALYSKELIDGQPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIAVAMKLMDVSGRRQLLLTTIPVLIVTLVILVIGSLVDFGNVAHAAISTVCVVVYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLAGVFAIYAVVPETKGMPLEVISEFFSVGARQAATAKNE	728

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g0136	728	MobiDBLite	consensus disorder prediction	336	356	-	-
	Aed9g0136	728	ProSitePatterns	Sugar transport proteins signature 2.	103	128	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Aed9g0136	728	Gene3D	MFS general substrate transporter like domains	490	717	IPR036259	-
	Aed9g0136	728	PRINTS	Sugar transporter signature	529	539	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Aed9g0136	728	PRINTS	Sugar transporter signature	98	117	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Aed9g0136	728	PRINTS	Sugar transporter signature	15	25	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Aed9g0136	728	PRINTS	Sugar transporter signature	628	649	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Aed9g0136	728	PRINTS	Sugar transporter signature	651	663	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Aed9g0136	728	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	7	716	IPR020846	GO:0022857
	Aed9g0136	728	Pfam	Sugar (and other) transporter	504	700	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Aed9g0136	728	Pfam	Sugar (and other) transporter	7	218	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Aed9g0136	728	MobiDBLite	consensus disorder prediction	395	417	-	-
	Aed9g0136	728	MobiDBLite	consensus disorder prediction	334	419	-	-
	Aed9g0136	728	Gene3D	MFS general substrate transporter like domains	2	242	IPR036259	-
	Aed9g0136	728	CDD	MFS_GLUT_like	10	191	-	-
	Aed9g0136	728	ProSitePatterns	Sugar transport proteins signature 1.	61	78	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Aed9g0136	728	SUPERFAMILY	MFS general substrate transporter	5	709	IPR036259	-
	Aed9g0136	728	PANTHER	-	1	725	-	-
	Aed9g0136	728	PANTHER	MONOSACCHARIDE-SENSING PROTEIN 1	1	725	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g0136	Aed-Chr9	954044	957054	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed9g0136	1	728	Organic Solute Cotransporters	AT4G35300	69.826	0.0	953

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed9g0136	-		-	gmx:100791976	1276.92

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed9g0136	9	954044	957054	Aed9g0136	9	954044	957054	ECH