Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0134 ATGGCTTTTTCCTCCTCCAAAGCACTTGTCCTTGCTTTCTCTTTTTGCCTATTTGCGTCTTTGGCTTTTGGACGCGATTTCTCCATTGTGGGCTATTCATCAGAGGACTTAAAATCCATGGATAAGCTCATTGAACTCTTTGAATCTTGGATGTCAAGACATTCCAAGATTTACGAGAGCATTGAGGAGAAGCTTCTTAGGTTCGAGGTTTTCAAGGACAACCTTAAGCACATTGATGAGACAAACAAGGTGGTCAGCAACTACTGGCTGGGGCTGAATGAGTTTGCTGATTTGACCCACCAAGAGTTCAAGAACAAATATCTTGGACTTAAGGTTGACTACTCTAGAACTAGAAGGAGAGAGTCCCCTGAAGAATTCACTTACAGAGATGTTGAATTGCCAAAGTCTGTGGATTGGAGAAAGAAAGGTGCTGTAGCCCCAGTGAAGAACCAAGGTTCATGCGGTAGCTGCTGGGCATTTTCTACTGTTGCGGCTGTTGAGGGAATAAACCAGATAGTTACGGGAAATTTAACAACACTGTCTGAGCAAGAGTTGGTTGACTGTGACAGAACTTACAACAATGGTTGCAATGGGGGTCTCATGGATTATGCGTTCTCCTTTATAGTACAAAACGGTGGACTCCATAAAGAGGAAGATTATCCTTACATCATGGAGGAAGGTACTTGCGAGATGACAAAGGAAGAAACCGAGGTTGTTACTATTAGCGGTTACCATGACGTGCCACAAAACAATGAACAGAGCCTATTGAAGGCCCTTGCAAACCAACCCCTCAGTGTAGCAATAGAGGCTTCAGGCAGAGATTTCCAATTTTATAGTGGGCCATGGCTTTCTCCTCCTCCTCCTCCTCCAAAACACTTATCCTTGCCTGCTCCTTCTGCCTATTTGCGTAGCTGCTGGGCATTTTCTACTGTTGTAGCAGTTGAGGGAATAAACCAGATTGTGACCGGAAATTTAACATCATTGTCTGAGCAAGAATTGATTGACTGTGACAGGGCTTACAACAATGGTTGCAACGGGGGTCTCATGGACTATGCATTCTCCTTTATAGTGGAAAATGCTGGACTCCATAAAGAGGAAGATTATCCTTACATTATGGAAGAAGGTACCTGCGAAATGACAAAGGAAGAAACCGAGGTTGTTACTATCAGCGGGTACCATGACGTGCCACAAAACAATGAACAGAGCTTATTGAAGGCCCTTGCAAACCAACCCCTCAGTGTGGCCATAGAGGCTTCGGGCAGAGATTTCCAATTTTACAGTGGGGTATGTATATAG 1296 0.4414 MAFSSSKALVLAFSFCLFASLAFGRDFSIVGYSSEDLKSMDKLIELFESWMSRHSKIYESIEEKLLRFEVFKDNLKHIDETNKVVSNYWLGLNEFADLTHQEFKNKYLGLKVDYSRTRRRESPEEFTYRDVELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTTLSEQELVDCDRTYNNGCNGGLMDYAFSFIVQNGGLHKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGPWLSPPPPPPKHLSLPAPSAYLRSCWAFSTVVAVEGINQIVTGNLTSLSEQELIDCDRAYNNGCNGGLMDYAFSFIVENAGLHKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGVCI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0134 431 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 151 162 IPR000169 -
Aed9g0134 431 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 303 428 - -
Aed9g0134 431 Gene3D Cysteine proteinases 300 431 - -
Aed9g0134 431 Gene3D Cysteine proteinases 26 293 - -
Aed9g0134 431 SMART Inhibitor_I29_2 47 103 IPR013201 -
Aed9g0134 431 CDD Peptidase_C1A 304 428 IPR039417 -
Aed9g0134 431 Pfam Papain family cysteine protease 304 428 IPR000668 GO:0006508|GO:0008234
Aed9g0134 431 Pfam Papain family cysteine protease 133 280 IPR000668 GO:0006508|GO:0008234
Aed9g0134 431 PANTHER - 303 428 - -
Aed9g0134 431 SUPERFAMILY Cysteine proteinases 304 427 IPR038765 -
Aed9g0134 431 SUPERFAMILY Cysteine proteinases 42 287 IPR038765 -
Aed9g0134 431 CDD Peptidase_C1A 134 278 IPR039417 -
Aed9g0134 431 Pfam Cathepsin propeptide inhibitor domain (I29) 47 103 IPR013201 -
Aed9g0134 431 SMART pept_c1 295 431 IPR000668 GO:0006508|GO:0008234
Aed9g0134 431 SMART pept_c1 133 291 IPR000668 GO:0006508|GO:0008234
Aed9g0134 431 PANTHER - 24 280 - -
Aed9g0134 431 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 24 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0134 Aed-Chr9 925407 930513 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0134 K16290 - gmx:100788466 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0134 9 925407 930513 Aed9g0134 9 925407 930513 ECH