Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0131 ATGGCCACCACCGCTACCGCCCCCGTCACCGAACCTCCCCTTTCCTCCGCCGAAACACCACCGGCCCCGCCTCCTCCGAAACAAGCGGCGCCTCCCCCGCCGCAACCGGCGGCAGTAGCAGCTGTGAAACCGGAGGGTCCAGTGTCCGATTCGAAAGCTTCAGCGGAAGCGAACGTAGTGGTGGTCCCGAGCTACTCTCGATGGTTCTCGTGGGATTCGATTCACGAATGCGAGGTGCGTCACCTCCCAGAGTTCTTCGAATTGGCGTCGAAGAGCCCTAGGGTTTACAAGTACTACAGGAACTCTATCGTGAAGTACTTCAGGTACAATCCCACCCGAAAAATCACCTTCACCGATGTCCGCAAAACGCTCGTTGGAGACGTAGGTTCCATCCGCAGAGTCTTCGATTTCCTCGAAACTTGGGGGCTCATCAATTTCCACCCCTCTTCGTCGTTCAGCAAACCGTTAAAGTGGGATGACAAAGAGTCCAAAGCCGATTCTGCCTCCAACTCCACCGATTCTTCTTCCGCTCCCGTCAAACAAAACACTAAGAGACTCTGCAGTGGCTGCAAAGCCGTTTGTACCATTGCTTGTTTTGCCTGTGACAAGTATGATTTGACTCTTTGTGCGAGGTGCTATGTTCGCGGCAACTATCGAGTTGGTGTGAACTCTTCAGATTTTAGGCGAGTGGAGATAAGTGAGGAGACAAAGACGGATTGGAGCGAAAAGGAGACCACGAATCTTCTTGAAGCTATTACGCATTACAGTGATGATTGGAAAAGGGTTTCTCAGCATGTTGCTGGCAGAACTGAGAAGGAGTGTGTTGCTCATTTTTTGAAGCTTCCTTTTGCGGATCAATTCCAGCATTATCAACAAATCCCTGCTGTCAATGGCACTGATGGCAGTTGTAATCAGTTAAAGAGGGTAACTAATGCCTCTGCTGAATCTCAATTGGATACTGTTGCCTCTGCTGAACCTAGTAAGAGAATGCGTCTCACACCTCTTGCAGATGCAAGCAATCCTATTATGGCTCAGGCTGCTTTCCTGTCTGCTTTGGCTGGGTCAGAGGTTGCTCAAGCTGCTGCTCAAGCTGCATTGACAACTCTGTCTGAGGTTTACAAAGCAACTAAAATAAATTACCGGTCCTTTCCAAGGAATACATTGCTGCAGGATGCTGCTATCGCGTCTAATGGTGGTAATACTTCAGATTCATTTCAAGGATCTCGATTGCACGCAAACATACAGCTTGAGAAGGAAGAGTTAGATGTGGAAAAAGCAATTTCTGAGATTATAGAAGTTAAGATGAAAAATATTCAAGACAAGCTTGTTCATTTTGAAGACTTAGACCTGCTGATGGAAAAAGAAGGCCAGCAGCTGGAGCAAATGAAAAATATGTTTTTCCTTGATCAGCTTACTCTTTTATTTCATAAATCATCTGCACCAAAAACTGGAGAATGCCAAGAAGGCACTAATGTAAAGACAAACCATGGCTGA 1494 0.4746 MATTATAPVTEPPLSSAETPPAPPPPKQAAPPPPQPAAVAAVKPEGPVSDSKASAEANVVVVPSYSRWFSWDSIHECEVRHLPEFFELASKSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETWGLINFHPSSSFSKPLKWDDKESKADSASNSTDSSSAPVKQNTKRLCSGCKAVCTIACFACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWSEKETTNLLEAITHYSDDWKRVSQHVAGRTEKECVAHFLKLPFADQFQHYQQIPAVNGTDGSCNQLKRVTNASAESQLDTVASAEPSKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKATKINYRSFPRNTLLQDAAIASNGGNTSDSFQGSRLHANIQLEKEELDVEKAISEIIEVKMKNIQDKLVHFEDLDLLMEKEGQQLEQMKNMFFLDQLTLLFHKSSAPKTGECQEGTNVKTNHG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0131 497 Gene3D - 66 150 IPR036388 -
Aed9g0131 497 SMART sant 236 284 IPR001005 -
Aed9g0131 497 ProSiteProfiles SANT domain profile. 235 286 IPR017884 -
Aed9g0131 497 SUPERFAMILY Homeodomain-like 236 285 IPR009057 -
Aed9g0131 497 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 13 493 - -
Aed9g0131 497 PANTHER SWI/SNF COMPLEX-RELATED 13 493 - -
Aed9g0131 497 MobiDBLite consensus disorder prediction 1 50 - -
Aed9g0131 497 ProSiteProfiles Myb-like domain profile. 232 282 IPR001005 -
Aed9g0131 497 MobiDBLite consensus disorder prediction 14 40 - -
Aed9g0131 497 Pfam SWIRM-associated region 1 412 475 IPR032451 -
Aed9g0131 497 CDD SANT 240 281 IPR001005 -
Aed9g0131 497 SUPERFAMILY Homeodomain-like 56 156 IPR009057 -
Aed9g0131 497 ProSiteProfiles SWIRM domain profile. 60 155 IPR007526 GO:0005515
Aed9g0131 497 Pfam SWIRM domain 63 146 IPR007526 GO:0005515
Aed9g0131 497 Coils Coil 416 436 - -
Aed9g0131 497 Gene3D - 235 286 - -
Aed9g0131 497 Pfam Myb-like DNA-binding domain 238 281 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0131 Aed-Chr9 912491 915420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0131 167 278 EF-hand Containing Proteins AT3G07740 28.346 1.96e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0131 K11649 - gmx:100779777 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0131 9 912491 915420 Aed9g0131 9 912491 915420 ECH