Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0118 ATGGCTCAGCCGCTCGTGAAGAAGGACGATGACCGCGACGACGAAGCTGAGTATTCCCCCTTTATGGGAATTGAAAAGGGATCTGTTCTTCAGGAGGCCAGGGTTTTTAATGATCCTCAACTAGATGCTAGGAGATGTTCACAGGTTATTACAAAACTCCTATACCTACTGAATCAGGGAGAGACGTTTACAAAGGTTGAAGCCACAGAAGTTTTCTTTGCTGTGACTAAGCTTTTCCAGTCTAAAGATATGGGATTAAGGAGAATGGTCTACCTGATGATAAAGGAGATCTCTCCCTCTGCAGATGAGGTTATCATCGTCACAAGCTCTCTCATGAAGGATATGAACAGCAAGATTGATATGTACCGAGCAAATGCCATTCGAGTGCTGTGTCGTATCACTGACGGAACCCTCCTTTCACAAATTGAGCGGTATTTAAAACAAGCCATTGTAGATAAAAATCCAGTTGTTTCAAGTGCTGCTCTAATTAGTGGCATTCATCTACTCCAGACGAATCCTGAGATTGTAAAAAGATGGAGCAATGAGGTTCAGGAAGCTGTTCAATCAAGAGCAGCCCTTGTACAATTTCATGCACTGGCTTTGCTACATCAGATACGACAGAATGATCGGCTAGCAGTTAGCAAGCTGGTTACCAGCTTGACAAGGGGAACTGTTCGCTCACCTTTAGCACAGTGCCTTTTGATCCGTTACACAAGTCAGGTTATTCATGAATCAGGCAATAATACACAGTCAGGGGAACGCCCCTTCTATGATTATCTTGAGAGTTGCCTTCGCCACAAGTCAGACATGGTAATTTTTGAAGCTGCCAGGGCAATAACAGAGCTCAATGGTGTAACAAGCCGAGAATTAACTCCAGCAATTACTGTTCTTCAGCTATTCTTAAGTTCGACTAAGCCAGTTTTGAGATTTGCTGCTGTCCGCACCTTGAACAAGGTGGCAATGACACATCCAATGGCAGTCACCAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAGAACAGAAGCATTGCTACCCTCGCTATTACTACACTTTTGAAAACAGGAAATGAATCTAGTGTGGATCGTCTTATGAAGCAGATCACAAATTTTATGTCTGATATTGCTGACGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCATTGTGCCTGAAGTTCCCTTTGAAATATCGATCTCTGATGAACTTTCTGAGTAATATTCTTAGGGAAGAGGGTGGTTTTGATTACAAAAAGGCAATTGTAGATTCAATTGTGATTCTCATTAGGGATATTCCTGATGCAAAGGAAGCTGGTTTGCTTCATCTTTGTGAGTTCATTGAAGACTGTGAGTTCACTTATTTGTCCACACAGCCCCGCATATTTGTTCTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGTTCGCGATAGGGCAACACTTTACCTGAACACACTTGGAGATGATGGTTCAGTTGTTGAGACTGAGAAAGATGTAAAGGACTTCCTGTTTGGGCCATTTGATATCCCACTTGTCAATCTGGAGACTAGTTTGAAAAATTATGTGCCTTCAGAAGAAGCTTTTGACATTAACTCCGTGCCTAAGGAGGTCAAGTCCCAGCCACTTGCAGAAAAGAAAGCCACTGGTAAAAAGCCAACTGGTTTGGGTGCTCCTCCTAGTGGTCCCGCATCAACTGCAGATGCATACGAGATAATGCTTTCTACCATGCCGGAGTGTGCAAACTTTGGGAAGCTTTTCAAGTCCTCAGCACCTGTGGAGCTCACTGAAGCTGAGACGGAATATGCAGTTAATGTCATTAAACACATTTTTGATAGGCATGTTGTGTTCCAGTTCAACTGCACAAACACGATACCAGAGCAATTATTGGAAGATGTTATTGTGACTGTGGATGCTTCAGAAGCAGATGAATTCTCAGAGGTGTTCTCCAAGCCTCTCAGGTGTCTTCCTTATGATTCCCCTGGACAGACTTTTGTGGCATTTGAGAAGCCGGAGGGAGTTCCAACAGTTGGAAAATTTTCTAACATTTTGAAATTTATTGTTAAAGAGGTTGACCCAACCACTGGTGAGGCTGACGATGACGGCGTTGAAGATGAATACCAGCTTGAGGATCTGGAGGTTGTTGCAGCAGATTATGTGTTGAAAGTGGGGGTGTCTAATTTTAGGAATGCATGGGAAAGCTTGGGCCCTGATTTTGAGCGAGTGGATGAGTATGGTCTTGGTCCTAGGGAGAGCTTGGCTGAAGCTGTAAATACTGTTACCAACCTACTTGGCTTGCAGCCCTGTGAGGGCACAGAGGAGGTTCCAGCCAATTCAAGATCACACACATGCTTATTGTCAGGTGTATTCATAGGGAATGTAAAGGTGCTTGTGCGGTTGTCATTTGGACTTGATGGTCCAAAAGATGTTGCAATGAAACTCTCTGTCAGATCTGAGGATGAAACAGTCAGTGGTGCCATTCATGATATTGTGGCAAGCGGCTAG 2508 0.4342 MAQPLVKKDDDRDDEAEYSPFMGIEKGSVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKIDMYRANAIRVLCRITDGTLLSQIERYLKQAIVDKNPVVSSAALISGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVIHESGNNTQSGERPFYDYLESCLRHKSDMVIFEAARAITELNGVTSRELTPAITVLQLFLSSTKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKKAIVDSIVILIRDIPDAKEAGLLHLCEFIEDCEFTYLSTQPRIFVLLRRCLFDSDDEVRDRATLYLNTLGDDGSVVETEKDVKDFLFGPFDIPLVNLETSLKNYVPSEEAFDINSVPKEVKSQPLAEKKATGKKPTGLGAPPSGPASTADAYEIMLSTMPECANFGKLFKSSAPVELTEAETEYAVNVIKHIFDRHVVFQFNCTNTIPEQLLEDVIVTVDASEADEFSEVFSKPLRCLPYDSPGQTFVAFEKPEGVPTVGKFSNILKFIVKEVDPTTGEADDDGVEDEYQLEDLEVVAADYVLKVGVSNFRNAWESLGPDFERVDEYGLGPRESLAEAVNTVTNLLGLQPCEGTEEVPANSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSEDETVSGAIHDIVASG 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0118 835 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 718 832 IPR032154 -
Aed9g0118 835 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 720 832 IPR009028 GO:0006886|GO:0016192|GO:0030117
Aed9g0118 835 MobiDBLite consensus disorder prediction 541 564 - -
Aed9g0118 835 Pfam Coatomer gamma subunit appendage platform subdomain 570 715 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Aed9g0118 835 SUPERFAMILY ARM repeat 32 510 IPR016024 -
Aed9g0118 835 Pfam Adaptin N terminal region 29 456 IPR002553 GO:0006886|GO:0016192|GO:0030117
Aed9g0118 835 PANTHER COATOMER SUBUNIT GAMMA 1 459 - -
Aed9g0118 835 PANTHER COATOMER SUBUNIT GAMMA 459 835 - -
Aed9g0118 835 Gene3D - 23 316 IPR011989 -
Aed9g0118 835 PIRSF Gamma-COP 457 833 IPR017106 -
Aed9g0118 835 PIRSF Gamma-COP 7 459 IPR017106 -
Aed9g0118 835 Gene3D - 717 833 IPR012295 -
Aed9g0118 835 PANTHER COATOMER SUBUNIT GAMMA 459 835 IPR017106 -
Aed9g0118 835 Gene3D Coatomer, gamma subunit, appendage domain 563 716 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Aed9g0118 835 PANTHER COATOMER SUBUNIT GAMMA 1 459 IPR017106 -
Aed9g0118 835 SUPERFAMILY Clathrin adaptor appendage domain 565 719 IPR013041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0118 Aed-Chr9 830186 837229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0118 K17267 - gmx:100814149 1540.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0118 9 830186 837229 Aed9g0118 9 830186 837229 ECH