Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0116 ATGTCTGGCTTCTACCGTTACAATTCTACTGCATCTCTCATCTTATATTCTATTTTGTCGGTTTTGCTTTTCGCTTTCAAGCTCCATCCTTTTTATTCATGTCTATTCTTCACTTCTTCAAGATTAATTAGTTGTTGGAATAATAAGCAAGAAATGGCTACTACTACTACACCTTCTTCCATTTCTTCAATTCTCCTCTCTCTTTCTCTATTGGTCATCGTCCTCTCCTTCGCTGTAAACTACGGCCAAGTCGCCGACAACCTTCCGGCGCCGGAGGACACGGCCAGCCTCCTCAAATCCTCCACCATCGGAAAAGTCCGTCTCTACGGCGCCGATCCCGCCATCATCAAGGCCCTCGCGAATTCCGGCATCGGAATCGTCATCGGCGCGGCCAATGGCGACATTCCGAGTCTCGCCGCCGATCCGAACGCGGCCGCTCAGTGGGTCAACGCGAACGTCTTGCCCTACTACCCAGCAAGCAACATCACTCTCATCACCGTCGGAAACGAGATTTTAACCTTAGCCGACCAGGGACTAATGACGCAGCTGGTCCCGGCGATGAAAAATGTCCAAAATGCCCTCAACGCTGCCTCGCTGGGCGGCAAGATCAAGGTCTCGACGGTGCACTCCATGGCCGTGTTGACTCAGTCGGACCCGCCGTCGTCGGGGTTGTTCAACCCGGCGCTCCAAGACACGCTGAAACAGTTACTCACGGTTCTCAAGGACAACAAATCGCCGTTCACTATAAACCCGTACCCGTTCTTCGCTTACCAGAGCGACCCGAGACCCGAAACGCTCGCCTTTTGCCTCTTCCAGCCCAACTCGGGCCGCGTCGATTCGGGCAACGGGAAGCTTTACACCAACATGTTTGATGCTCAGGTAGATGCTGTACATTCAGCTTTGAGTGGCATGGGATTCCAGGACGTGGAGATTGTGGTTGCTGAGACTGGATGGCCCTCACGTGGTGACAGTAATGAAGTGGGACCCGGTCTTGAAAATGCAAAGGCCTATAACGGGAACCTGATTTCTCATCTTAGATCATTGGTTGGGACACCTTTGATGCCTGGGAAGTCTGTGGACACTTACATTTTTGCACTTTATGATGAGGATCTTAAACCAGGCCCAGCTTCTGAACGTGCTTTTGGTCTCTTCAAGACTGATCGTACCGTCTCATACGATGTTGGATTAACCAAGTCTAGCCAACAGACTCCAACAACTCCTGTAGCACCAAACACTGGTGGATGGTGTGTGCCCAAAGCTGGAGTTTCCAATGCTCAGTTGCAGGCCAATCTTGACTACGCCTGTAGCCAAGGCATAGATTGTGGGCCAATTCAACAAGGAGGCCCTTGTTTTGAGCCTAACACGCTAGCATCCCATGCTTCATTTGCCATGAATCTCTACTACCAAACCTCTGCCAAAAACCAATGGAACTGTGATTTCTCTCAAACAGCAACACTCACATCCCAAAATCCAAGTTACAATGCTTGCATCTACGCTGGTGGGAGCACCTGA 1512 0.5073 MSGFYRYNSTASLILYSILSVLLFAFKLHPFYSCLFFTSSRLISCWNNKQEMATTTTPSSISSILLSLSLLVIVLSFAVNYGQVADNLPAPEDTASLLKSSTIGKVRLYGADPAIIKALANSGIGIVIGAANGDIPSLAADPNAAAQWVNANVLPYYPASNITLITVGNEILTLADQGLMTQLVPAMKNVQNALNAASLGGKIKVSTVHSMAVLTQSDPPSSGLFNPALQDTLKQLLTVLKDNKSPFTINPYPFFAYQSDPRPETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSGMGFQDVEIVVAETGWPSRGDSNEVGPGLENAKAYNGNLISHLRSLVGTPLMPGKSVDTYIFALYDEDLKPGPASERAFGLFKTDRTVSYDVGLTKSSQQTPTTPVAPNTGGWCVPKAGVSNAQLQANLDYACSQGIDCGPIQQGGPCFEPNTLASHASFAMNLYYQTSAKNQWNCDFSQTATLTSQNPSYNACIYAGGST 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0116 503 SMART X8_cls 414 498 IPR012946 -
Aed9g0116 503 Gene3D Glycosidases 76 403 - -
Aed9g0116 503 ProSitePatterns Glycosyl hydrolases family 17 signature. 309 322 IPR000490 GO:0004553|GO:0005975
Aed9g0116 503 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 62 495 IPR044965 GO:0004553|GO:0005975
Aed9g0116 503 Pfam Glycosyl hydrolases family 17 78 394 IPR000490 GO:0004553|GO:0005975
Aed9g0116 503 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 62 495 - -
Aed9g0116 503 SUPERFAMILY (Trans)glycosidases 79 394 IPR017853 -
Aed9g0116 503 Pfam X8 domain 415 485 IPR012946 -
Aed9g0116 503 Gene3D - 411 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0116 Aed-Chr9 818026 821988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0116 77 498 Miscellaneous Gene Families AT2G16230 66.118 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0116 - - gmx:100778892 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0116 9 818026 821988 Aed9g0116 9 818026 821988 ECH