Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0111 ATGAGTTCTTTAGTCGATTTTCAAAAGAGAGTGAAGCTGGGATACCAGTACCTGATATCACACCTGTTGACCCTGTGCCTGCTTCCTCTGATGTCCGTGATCATCCTCCAGGCCTCCCAGATGAAGGCTAATGACATCCAGCACCTGTGGGCCCACCTCCAGTACAATCTCATCAGCTTCATTGCTTTCTCCGCCATCCTCGTGTTGGGATCCACACTCTACATCATGACCCGACCCAGATCCATCTTCCTCCTCGACTACTCCTGCTACCGCCCCCCTCACCACCTCCGCGTCCGCTACAAGCAGTTCATAGACCACTCCACTCTCACCGGCGACTTCCTCCCTTCTTCCCTCGACTTCCAGCGCAAGATTCTCCTCCGCTCCGGCCTCGGCGAAGACACCTACGTCCCCGAGGCCATGCACTCCATCCCCCCTCTCCCCTCCATGTCCGCCGCCAGGGACGAGGCCCAGCAGGTCGTGTTCGGCGCCCTCGACAACCTCTTCGCTTCCACTAACATCAATCCCAAACACATCGGCATCCTCGTCGTTAACTGCAGTCTCTTCAACCCCACCCCCTCCCTCTCCTCCATGATCGTCAACCACTACAAACTCCGCGGCAACGTCAAAACCTTCAACCTCGGCGGCATGGGCTGCAGCGCTGGCGTCATCTCCCTCGATCTCGCCAAAGACATGCTCCAGGTTCACCGCAACACTTACGCGGTCGTCGTCAGCACCGAGAACATCACTCAGAATTGGTACTTCGGGAACAACAAGGCTATGTTGATACCGAACTGCCTCTTTCGCCTGGGTGGGGCCGCCATTCTCCTCTCCAACAAAAGCTCTGACAGAACGAGAGCCAAATACAAGCTGGTGCATGTGGTTAGGACTCACAAGGGGGCAGACGATAAGGCCTTTAGGTGCGTCTACCAGGAACAAGACGATGTCGGAAAAACCGGCGTGTCTTTGTCGAAGGATCTTATGGCTATTGCTGGTGGGGCTCTCAAGACTAACATAACCATGCTGGGTCCACTTGTCTTGCCTATAAGTGAGCAGCTTCTGTTCTTTCTCACCCTTGTGGTTAAGAAGCTTTTCAATGCCAAGATGAAGCCTTATATCCCCGATTTCAAGCTTGCCTTTGATCACTTCTGCATTCACGCTGGTGGGAGGGCCGTGATCGACGAGCTGGAGAAGAATCTGCAGCTTCTTCCGGTGCATGTGGAGGCTTCAAGGATGACGCTGCACAGGTTTGGAAATACTTCTTCTAGTTCGATTTGGTACGAGCTGGCTTACACGGAGGCGAAGGGGAGGATGAGAAAGGGGCACAGAGTGTGGCAGATTGCGTTTGGTAGTGGCTTTAAGTGTAACAGTGCGGTCTGGGAGGCGCTTAGACATGTCAACCCCTCACCCAACACTCCCTGGGATGATTGCATTCATAGGTACCCTGTTCAGATTGATACATAG 1461 0.54 MSSLVDFQKRVKLGYQYLISHLLTLCLLPLMSVIILQASQMKANDIQHLWAHLQYNLISFIAFSAILVLGSTLYIMTRPRSIFLLDYSCYRPPHHLRVRYKQFIDHSTLTGDFLPSSLDFQRKILLRSGLGEDTYVPEAMHSIPPLPSMSAARDEAQQVVFGALDNLFASTNINPKHIGILVVNCSLFNPTPSLSSMIVNHYKLRGNVKTFNLGGMGCSAGVISLDLAKDMLQVHRNTYAVVVSTENITQNWYFGNNKAMLIPNCLFRLGGAAILLSNKSSDRTRAKYKLVHVVRTHKGADDKAFRCVYQEQDDVGKTGVSLSKDLMAIAGGALKTNITMLGPLVLPISEQLLFFLTLVVKKLFNAKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGHRVWQIAFGSGFKCNSAVWEALRHVNPSPNTPWDDCIHRYPVQIDT 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0111 486 PANTHER 3-KETOACYL-COA SYNTHASE 9 484 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed9g0111 486 Pfam FAE1/Type III polyketide synthase-like protein 74 363 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aed9g0111 486 SUPERFAMILY Thiolase-like 291 460 IPR016039 GO:0016746
Aed9g0111 486 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 486 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed9g0111 486 CDD CHS_like 64 459 - -
Aed9g0111 486 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 379 460 IPR013747 -
Aed9g0111 486 PANTHER 3-KETOACYL-COA SYNTHASE 4 9 484 - -
Aed9g0111 486 Gene3D - 121 461 IPR016039 GO:0016746
Aed9g0111 486 SUPERFAMILY Thiolase-like 68 285 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0111 Aed-Chr9 785900 787360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0111 9 484 Miscellaneous Gene Families AT1G19440 79.202 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0111 K15397 - cpap:110813811 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0111 9 785900 787360 Aed9g0111 9 785900 787360 ECH