Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0099 ATGACTGACATCATGTCCGTACCTGTTGACCGACAAATGAAACATGGTAATGAAATTCATGAATGTTCCGAGGATGAAAGGAAGAAAAAGCCAGGATCATTCAAGAAGGTGGCAATCAGTGCCTCATCTAAGTTCAAGCATTCATTTTCCAAGAAGGGGAGAAGGCACAGCAGGGTTATGTCTCTTTCTATTGAGGATAATCTTGATGCAGAAGAGTTGCAAGCGGTTGATGCTCTTCGCCAAGCACTCATCTTGGAAGAGCTATTGCCCTCAAAACATGATGATCACCATATGATGCTAAGATTCTTGAGGGCAAGGAAGTTTGACATTGAAAAAACAAAACAAATGTGGGCAGATATGCTCAAGTGGAGGCAGGAATTTGGTGCTGACACTATGATGGAGGATTTTGAATTCAAGGAAAAAGATGAGGTTCTAAAATACTACCCACAAGGACATCATGGTGTTGACAAGGATGGCAGGCCTATTTACATTGAAAAGTTGGGTCAGGTTGACTCTACCAAGATGATGCAAGTAACAACAATGGAACGATATCTCAAGTACCATGTCAGAGAATTTGAGAGGACCTTTACTGTTAAGTTGCCGGCATGTTCCATTGCAGCAAAGAAGCACATTGACCAAAGTACAACTATTTTGGATGTGCAAGGACTGGGCCTTAAAAGTATGAACAAAGTTGCAAGGGATCTCCTCCAGAGGCTTCAGAAGATTGATGGTGACAACTACCCTGAGTCACTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTATTGTGGAGCACCGTTAAGTCATTCCTAGATCCCAAGACCACCTCCAAAATCCATATGGTTCAAAATGGTGAGGGCAAATGCAAGAGAAAAACCTTATCCGGGATTGAGGAGAAAACAATCATAGAAGGTGATTCAGCACATCAAAATGTAGGAAAGAAAGAATCATTTCCACAGACATATGATGTTGATGTGAAATGTCTATCTCCAAAAAAGCAACATGCTGTGTGTAAATATGACGCATTTGTCCCTGTGCTTGGCAAGTCAGTCGATTCATCTTGGAATAAATTAATACAGAATGACAAAGATGCACATTCTAAAGCTGCAGATTGTTTTGCTAGCAACACTTCTTCTGATGGGTATAGCAATCATTTTGTTGGAGGAATCATGGCCATTATTATGGGAATTATAACAATGATCCGCATGACAAAGAACATGCCAAAGAAAATCACTGATGCAACACTGTATGGAAGCTCAGAGTATTATGATGGCACTATGATGAAAGCATCCACCAATATTGTATGCAATGATTACATGTCCGTGATGAAGCGCATGGCGGAACTAGAAGATAAAGTCACTGTTCTCAACAAGAGACCTATCATACCTCCCGAAAAGGAGGAAGTGCTGAATAATGCTTTATGCAGAGTCACCAAACTGGAACATGACTTGTTTGCAACCAAAAAGGCACTTGATGATGCCCTTACTCGACAAGTAGAACTCCAATCTCAAATTGACAAGAAGAAGAAAAAGAGGAAGACCAAGATGTTCCGCCTCCGCTGTTTTGCTGCTTGA 1584 0.411 MTDIMSVPVDRQMKHGNEIHECSEDERKKKPGSFKKVAISASSKFKHSFSKKGRRHSRVMSLSIEDNLDAEELQAVDALRQALILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWADMLKWRQEFGADTMMEDFEFKEKDEVLKYYPQGHHGVDKDGRPIYIEKLGQVDSTKMMQVTTMERYLKYHVREFERTFTVKLPACSIAAKKHIDQSTTILDVQGLGLKSMNKVARDLLQRLQKIDGDNYPESLNRMFIINAGSGFRLLWSTVKSFLDPKTTSKIHMVQNGEGKCKRKTLSGIEEKTIIEGDSAHQNVGKKESFPQTYDVDVKCLSPKKQHAVCKYDAFVPVLGKSVDSSWNKLIQNDKDAHSKAADCFASNTSSDGYSNHFVGGIMAIIMGIITMIRMTKNMPKKITDATLYGSSEYYDGTMMKASTNIVCNDYMSVMKRMAELEDKVTVLNKRPIIPPEKEEVLNNALCRVTKLEHDLFATKKALDDALTRQVELQSQIDKKKKKRKTKMFRLRCFAA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0099 527 Gene3D - 128 332 IPR036865 -
Aed9g0099 527 CDD SEC14 141 291 IPR001251 -
Aed9g0099 527 Pfam CRAL/TRIO, N-terminal domain 92 119 IPR011074 -
Aed9g0099 527 SUPERFAMILY CRAL/TRIO domain 140 287 IPR036865 -
Aed9g0099 527 Coils Coil 442 462 - -
Aed9g0099 527 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 284 518 - -
Aed9g0099 527 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 7 287 - -
Aed9g0099 527 SMART CRAL_TRIO_N_2 95 120 IPR011074 -
Aed9g0099 527 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 140 323 IPR001251 -
Aed9g0099 527 SMART sec14_4 140 312 IPR001251 -
Aed9g0099 527 Pfam CRAL/TRIO domain 146 288 IPR001251 -
Aed9g0099 527 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 284 518 - -
Aed9g0099 527 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 7 287 - -
Aed9g0099 527 Coils Coil 494 514 - -
Aed9g0099 527 SUPERFAMILY CRAL/TRIO N-terminal domain 66 136 IPR036273 -
Aed9g0099 527 Gene3D - 39 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0099 Aed-Chr9 708097 712063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0099 101 304 Acyl Lipid Metabolism Gene Families AT5G47730 26.667 1.95e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0099 - - gmx:100798374 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0099 9 708097 712063 Aed9g0099 9 708097 712063 ECH