Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0085 ATGGAAGCTATCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGTCAACAACAGGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGTTCAGATAATATGGTTACCGATGAGTTAGAGCTTCAGCAACATCAGAAACTTGAGAAGCTATACATATCAACACGTGCTGGAAAGCATTATCAAAGGGATATTGTCCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGGAACAAAGTTATCTGAAGATAGCAGGAAATATGGTGCAGATAATACATGTACCAGTGGTAGTACACTATCAAGAGCTGCGCTAAATTATGCACGTGCTCGTGCACAAATGGAGAAGGAGCATGGGAGCTTACTAAAAGCTCTTGGCACACAGGTTGCAGAGCCCTTAAGAGCAATGGTGATGGGAGCTCCATTGGAGGATGCCCGGCATCTTGCTCAACGTTATGACAGAATGCGACAGGAAGCCGAAGCCCAGGCTATTGAAGTTTCCAAACGCCAGGCAAAGGTAAGAGAAACTCCAGGCAATGCTGAGAATTCTATGAAGCTGGAAGCAGCTGAAACAAAGTTGCAAGACCTGAAGACAAACATGGCCATATTGGGAAAAGAAGCAGCTGCTGCAATGGCTGCTGTGGAAGCACAGCAACAGAGGTTAACCCTCCAGCGTCTTATAGCTATGGTTGAAGCAGAGCGTGGCTATCATCAAAGAGTACTCCAAATACTTGATCAGCTTGAGGGAGAGATGATATCAGAACGACAACGAATTGAAGCCCCTCCTACACCTAGTGCGGATAGCAGCATGGCACCCCCATCCTATGAAGAAGTAAATGGTGTATATGCTTCTCAAGCACATAATGGCTCAACAGATAGTATGGGTTATTTCTTAGGAGAGGTTTTATTTCCCTACCATGCTGAGTCTGAAGTTGAATTGAATCTATCAATTGGTGATTATATTGTCATTCGAAAGGTGACAAACAATGGATGGGCTGAGGGTGAAAGCAAAGGGAAAGCAGGTTGGTTTCCATTTGGTTACGTTGAAAGAAGGGAGCGAGTCCTCGCAAGCAAGGTGGCTGAAGCTCCAGCCAGCATTCTCAGCATTCATGTCCTGTTTTATTAG 1146 0.4529 MEAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDELELQQHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGADNTCTSGSTLSRAALNYARARAQMEKEHGSLLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVRETPGNAENSMKLEAAETKLQDLKTNMAILGKEAAAAMAAVEAQQQRLTLQRLIAMVEAERGYHQRVLQILDQLEGEMISERQRIEAPPTPSADSSMAPPSYEEVNGVYASQAHNGSTDSMGYFLGEVLFPYHAESEVELNLSIGDYIVIRKVTNNGWAEGESKGKAGWFPFGYVERRERVLASKVAEAPASILSIHVLFY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0085 381 Coils Coil 149 176 - -
Aed9g0085 381 SMART SH3_2 304 359 IPR001452 GO:0005515
Aed9g0085 381 Gene3D SH3 Domains 291 372 - -
Aed9g0085 381 PANTHER SH3 DOMAIN-CONTAINING 1 368 - -
Aed9g0085 381 SUPERFAMILY SH3-domain 300 370 IPR036028 GO:0005515
Aed9g0085 381 Coils Coil 1 21 - -
Aed9g0085 381 Coils Coil 186 213 - -
Aed9g0085 381 PANTHER PROTEIN, PUTATIVE-RELATED 1 368 - -
Aed9g0085 381 ProSiteProfiles Src homology 3 (SH3) domain profile. 301 360 IPR001452 GO:0005515
Aed9g0085 381 Coils Coil 220 240 - -
Aed9g0085 381 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Aed9g0085 381 SUPERFAMILY BAR/IMD domain-like 47 258 IPR027267 -
Aed9g0085 381 Pfam Variant SH3 domain 308 356 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0085 Aed-Chr9 603280 610122 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0085 - - gmx:100783004 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0085 9 603280 610122 Aed9g0085 9 603280 610122 ECH