Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0071 ATGCCTGCCCTGGCTTGTTGCGTGGATGCTGCAGCACCTCCCGGCTATGCATTTGCCGGTGACATCTCTTTTCCGGCGCCGGTCCCCTTTACTGGCGTACCTCCTGCCACATCAGACGACAACAACAACAATAACAACCATTGGTCGCCGTCCCTCTCCTCAGCGCTCTACAACGTCGACGGATGGGGCGGCCCCTACTTTGCCGTCAACACCGCCGGGAACATCTCCGTGCGCCCTCACGGCCCGGACACCCTGTCTCACCAGGAGATCGATTTGCTGAAGATTGTGAAGAAGGCCTCCGATCCCAAATCTCTTGGGGGTCTGGGCCTTCAGCTTCCTCTCATTGCCCGCTTCCCTGACGTTCTCAAGAACCGGTTGGAGTCCCTTCAGTCAGCGTTCGATTACGCAATCCAATCCGGAGGGTTCGAGTCCCATTACCAAGGAGTTTACCCCGTGAAATGCAACCAGGACCGGTTCGTAGTGGAGGATATCGTCAAATTCGGTTCGCCCTTCCGGTTCGGTCTGGAGGCAGGTTCCAAGCCGGAACTCCTTCTGGCCATGAGCTGTCTATGCAAAGGTAACCCCGACGCGCTTTTGATTTGCAACGGCTTCAAGGACGCGGAGTACATTTCCCTTGCCCTGGTTGCCAACAAGCTTGCGCTCAACACCGTGATTGTTCTGGAGCAAGAGGAGGAGGTTGATTTGATTGTTGAGTTGAGCAAGAAGCTATGCATTAGGCCCGTGATTGGGCTTCGTGCGAAGCTTCGTACCAAGCATTCAGGGCATTTCGGCGGGACTTCAGGAGAGAAGGGGAAGTTTGGACTTACCACATCTCAGATTCTGAGGGTTGTGAAGAAGCTGGACCTGGCAGGCATGCTGGATTGCTTGGAACTGTTGCATTTTCATATTGGTTCTCAGATTCCCTCAATCGCGTTGCTTACTGATGGCGTGGGAGAGGCTGCGCAGATCTACTGCGAGCTTATTCGGCTCGGGGCCAACATGCGAGTCATCGATATTGGAGGTGGACTGGGCATCGATTACGACGGTTCCAAATCTTGTGACTCTGATATTTCCGTTGAGTACGGTCTCGAGGAATATGCTGCTGCGGTGGTTCACGCGGTTCAGTGTGTGTGCGACCGAAGGTCCGTCAAGCACCCTGTTATCTGTAGCGAGAGTGGAAGAGCCATCGTGTCTCATCATTCGGTCTTGATTTTCGAGGCGGTTGGCACCAGCAGCACCACCGGGGGAGGAGCTTCTCTGGCATTGTCCACGCATTATCTGGCGGAGGAGCTGTCGGAGGATTACCGCAATCTGTCGGAGTTGGCGTTTCGAGGGGACTATGAAACGTGCCTGGTGTACACGGAGGAAATGAAAGAGCGTTGCGTGGAGCAGTTCAAACAGGGGGCGGTGTGCATGGAACAGCTGGCAGCGGTGGAGGGACTGTGTGAGTTGGTGAGGAAGGCTGTTGGGGAGGCGGAATCGGTTCGGAGATATCACGTGAACTTGTCTGTTTTCACGTCTGTTCCAGACGCGTGGGGCATTCAACAAGTGTTTCCCATTATACCCATTCACCGTTTGGACGAGGAGCCTTGCGTGAGGGGTATTCTCTCTGACTTAACTTGTGACAGCGATGGGAAGATTGACAAGTTCATCAACGGAGAGTCGAGCCTTCCGCTGCATGAAATGGGAGGAGAGAGGAGTTACTATCTTGGAATGTTTTTGGGTGGGGCTTACGAGGAGGCGCTCGGTGGATTCCACAACTTGTTCGGCGGCCCCAGCGTGGTGAGGGTGTCTCAGAGCGACGGTCCTCACAGCTTCGCGGTCACGAGTGCCGTGCCGGGGCCATCCTGTGGAGATGTTCTTCGAGTGATGCAGCACCAGCCCGAGCTCATGTTCGAGACCCTCAAGCACCGCGCCCACGAGTATGTCAGCCACGATGACGCAGCAGCAGTTCTGGCCGCTGGCCTTGCTCGCACCTTTGACAGAATGCCTTACCTGGTGTCGCTGTCTTCCTTTGAAGCTGCTGAAATTGCTGCTGCTGTTCCTACTTCCCAAGATGAGGGGGAGCAGTGGTCTTATTGCCTTGCTTGA 2091 0.5524 MPALACCVDAAAPPGYAFAGDISFPAPVPFTGVPPATSDDNNNNNNHWSPSLSSALYNVDGWGGPYFAVNTAGNISVRPHGPDTLSHQEIDLLKIVKKASDPKSLGGLGLQLPLIARFPDVLKNRLESLQSAFDYAIQSGGFESHYQGVYPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMSCLCKGNPDALLICNGFKDAEYISLALVANKLALNTVIVLEQEEEVDLIVELSKKLCIRPVIGLRAKLRTKHSGHFGGTSGEKGKFGLTTSQILRVVKKLDLAGMLDCLELLHFHIGSQIPSIALLTDGVGEAAQIYCELIRLGANMRVIDIGGGLGIDYDGSKSCDSDISVEYGLEEYAAAVVHAVQCVCDRRSVKHPVICSESGRAIVSHHSVLIFEAVGTSSTTGGGASLALSTHYLAEELSEDYRNLSELAFRGDYETCLVYTEEMKERCVEQFKQGAVCMEQLAAVEGLCELVRKAVGEAESVRRYHVNLSVFTSVPDAWGIQQVFPIIPIHRLDEEPCVRGILSDLTCDSDGKIDKFINGESSLPLHEMGGERSYYLGMFLGGAYEEALGGFHNLFGGPSVVRVSQSDGPHSFAVTSAVPGPSCGDVLRVMQHQPELMFETLKHRAHEYVSHDDAAAVLAAGLARTFDRMPYLVSLSSFEAAEIAAAVPTSQDEGEQWSYCLA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0071 696 SUPERFAMILY Alanine racemase C-terminal domain-like 493 600 IPR009006 GO:0003824
Aed9g0071 696 TIGRFAM speA: arginine decarboxylase 48 666 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PANTHER ARGININE DECARBOXYLASE 1 675 - -
Aed9g0071 696 SUPERFAMILY PLP-binding barrel 118 400 IPR029066 -
Aed9g0071 696 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 145 398 IPR022644 GO:0003824
Aed9g0071 696 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 150 168 IPR022653 -
Aed9g0071 696 Gene3D Alanine racemase 119 400 IPR029066 -
Aed9g0071 696 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 57 599 IPR009006 GO:0003824
Aed9g0071 696 PIRSF ARGDC 35 671 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 Gene3D - 417 494 - -
Aed9g0071 696 PRINTS Arginine decarboxylase signature 118 133 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 200 215 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 576 597 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 378 395 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 142 156 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 526 551 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 250 272 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 226 247 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PRINTS Arginine decarboxylase signature 501 522 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 PANTHER ARGININE DECARBOXYLASE 1 675 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 CDD PLPDE_III_ADC 117 597 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aed9g0071 696 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 331 344 IPR022657 -
Aed9g0071 696 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 576 589 IPR000183 GO:0003824
Aed9g0071 696 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 174 186 IPR000183 GO:0003824
Aed9g0071 696 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 293 306 IPR000183 GO:0003824
Aed9g0071 696 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 407 IPR000183 GO:0003824
Aed9g0071 696 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 150 168 IPR000183 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0071 K01583 - gmx:548071 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0071 9 511708 513798 Aed9g0071 9 511708 513798 ECH