Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0069 ATGGAGGCGCGTGACAGTGAGCAAGGAGGAAGTTCCGTGGAGCAAACCCCAGAGCAACTGGTCGCCCGTGCCATAGCCCCCGTCAAGAAGGATTTCCTCCGTCCTCCTCCTGTTCGCTCTTCCTCTCCAAACGACGACGTTTCCATTCCCAATGATAACAACAACAATACCTCTGTTCTCGCCAAGGAGAAGAAGTCCAAGCGCCAACTCAAACGCGAACGTCGTCAGGAACAAAAGTCAGCACGAAACCTCTGTCCCGTAATTGCCAAGTCAGGGGATGGCTCTAAGTCAAAAGGGAATGACTTGGAAAATAAAGATGGAGTTGACACTGGTTCAAATAAGTGTGATCATTTTGATGACAGTGGCTCTTGTGTTGTTACCTCTGACTCAGGTTCTAAGTTGGAATGCCCTGAAGAAGTTATAAAAGATGATGATGACGACAATGACATAGATGGAAAATCTGATTCTGATGTAGTTTGTCCCCAGAAGAGGAGAAAAACTGCAGAAAATTGTTGTCCTAAGGAGGCAGAAAATGAAGTTTGTGTAACTTGGCTTCATACTGCTGAAACAGGTGTTAGTGTTACTGAGGAAATTGTTGAAAGAAGTTGCACAAAATCTGAACCCGAAGCCGGAACTGATTTTATAACCCCAGAAACTGATTTAAGCCTGAAGCTGCACTCACGTGAAAAGAAGCTTATTGATTTTAGGGAGAAGTTGTATCTGGCACCCTTGACCACTGTTGGCAATCTCCCTTTCAGAAGAGTTTGCAAAGTATTAGGAGCTGATGTAACTTGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGTACACACACACACACACACACACACACACACACACATATATATGGATTTTTTGCTGTCGACTTTGATTACTTTCTTTCATCCTCAGTACGATATATATTTTCTGTCTGGAGGTCAAGCCTCAGAATGGGCATTGCTAAGACGTCATTCATCTGAAGATTTATTTGGTGTGCAAATCTGTGGGTCACATCCAGATTCTGTGGCACGAACAGTTGAACTAATAGAGCAAGAGTGTACAATAGACTTTGTTGATATAAATATGGGTTGCCCTATCGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTAACAAAACCAACGCGGATGAAAAGTATTGTAGAAGTAGCTTCAGGCACAGCGGAAAAACCAATAACTATCAAGGTACGGACTGCTTATTTTGAAGGGAAGAATCGCATTGATTCTCTGATAGCAGACATTGGCTCTTGGGGTGCCAGTGCCGTGACAATACATGGTAGGTCACGTCAACAACGCTATAGCAAGCTTGCTGACTGGGACTACGTATACCAGTGTACAAGGAAAGCCCCCATTACATTGCAAGTAGTGGGTAATGGAGATGTTTTTTCATTTGTAGACTGGAACAACCACAGAACTGAATGCCCTGAACTTGCTACGGACATGATTGCTCGTGGTGCACTGATTAAACCTTGGATATTTACTGAGATCAAGGAACAGAGACATTGGGACATAAGTTCTGGCGAGCGTCTAAATATTCTCAAAGATTTTGTGACTTTTGGCCTTGAACACTGGGGTTCTGACACTAAAGGGGTTGAGACAACAAGGCGGTTCTTGTTGGAATGGCTTAGCTACACTTTCAGGTATATACCTGTTGGTCTTTTAGATGTAGTTCCACCACGATTAAACTGGCGTCCACCATCTTACTATGGGCGTGATGAGCTTGAGACACTGATGGCCTCAGACTCTGCTGCTGATTGGATACGAATATCAGAGATGCTACTTGGCAAGGTTCCAGATGGCTTTACATTTGCTCCAAAGCATAAATCAAATGCTTACGATAGAGCTGAAAATGGTTGA 1884 0.4363 MEARDSEQGGSSVEQTPEQLVARAIAPVKKDFLRPPPVRSSSPNDDVSIPNDNNNNTSVLAKEKKSKRQLKRERRQEQKSARNLCPVIAKSGDGSKSKGNDLENKDGVDTGSNKCDHFDDSGSCVVTSDSGSKLECPEEVIKDDDDDNDIDGKSDSDVVCPQKRRKTAENCCPKEAENEVCVTWLHTAETGVSVTEEIVERSCTKSEPEAGTDFITPETDLSLKLHSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQVHTHTHTHTHTHIYMDFLLSTLITFFHPQYDIYFLSGGQASEWALLRRHSSEDLFGVQICGSHPDSVARTVELIEQECTIDFVDINMGCPIDIVVNKGAGSALLTKPTRMKSIVEVASGTAEKPITIKVRTAYFEGKNRIDSLIADIGSWGASAVTIHGRSRQQRYSKLADWDYVYQCTRKAPITLQVVGNGDVFSFVDWNNHRTECPELATDMIARGALIKPWIFTEIKEQRHWDISSGERLNILKDFVTFGLEHWGSDTKGVETTRRFLLEWLSYTFRYIPVGLLDVVPPRLNWRPPSYYGRDELETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAYDRAENG 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0069 627 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 311 627 - -
Aed9g0069 627 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 22 288 - -
Aed9g0069 627 MobiDBLite consensus disorder prediction 41 60 - -
Aed9g0069 627 Coils Coil 60 80 - -
Aed9g0069 627 ProSitePatterns Uncharacterized protein family UPF0034 signature. 359 377 IPR018517 GO:0008033|GO:0017150|GO:0050660
Aed9g0069 627 CDD DUS_like_FMN 238 510 IPR035587 -
Aed9g0069 627 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 22 288 - -
Aed9g0069 627 SUPERFAMILY FMN-linked oxidoreductases 238 588 - -
Aed9g0069 627 MobiDBLite consensus disorder prediction 96 113 - -
Aed9g0069 627 Gene3D Aldolase class I 233 513 IPR013785 -
Aed9g0069 627 Pfam Dihydrouridine synthase (Dus) 327 513 IPR035587 -
Aed9g0069 627 MobiDBLite consensus disorder prediction 1 113 - -
Aed9g0069 627 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 311 627 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0069 K05544 - gmx:100783494 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0069 9 480738 486445 Aed9g0069 9 480738 486445 ECH