Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0064 ATGGAGGAGAGTAAGTCGAGAAAAAATGGTGGGAAGGGAGAGATTATGGATGGTTCCAAGATTATGGAGTTAGTTGGAAACGAGCAAGTTTTCAGCAACTTTGTGGACCATAAGTTTGATGAGTTGGATAAAGACAGAGACGGAAAACTCTCCATGAAGGAGCTTGAACCTGCTGTTGCTGACATTGGTGCTGGTCTTGGTTTGCCTGCTCAAGGCACTAGTCCTGATTCAGATCACATCTATTTTGAGGTCTTGAATGAGTTCACCCATGGCAAGCAAGAAAAAGTGAGCAAGACTGAGTTCAAAGAGGTTCTCTCAGACATTCTTTTGGGCATGGCTGCTGGACTAAAGCAAGACCCTATTGTTATACTCCGCATGGATGGGGAAGATCTCCTTGAGTTTGTTAATGGTCCAAGTTATGAAGCAGAAATGGCATCCATTTTCTCTCAGATTGAGTCCCCTAGTGGATCCCTTCGTGAACATGTAATTGAAGCTTTTGGGAGACTTACTGTTGATCAAGGAATTCCTCCAACATCAGATTCTTGGGTTTTCAACAACATTGTGGATCCAGCACTGTCTCAAGCTGGCCTTTCTTTGGACAAGCCTGCTGCTCAAGAGACATTTTTGGAAGAATTTAAGAAAGTGGCTTTGAGTGTGGTTGATTTTCTTAAAGAGAAACCTGCCATTGTTGCCCACAGTGAAAACACATTTGATGGACGCGGTGTCAAGAGACTTTTATCCAACAAGTTTGAACTAGACAGGACGTTGAACTTAGCTTTAGAGAATCTGCCAAAAGATTGCAATGGGAAAATATCAAAGGACTATCTGCGGGTGGCACTAGATCTGGTGTCTCCATCTGCTGGTTTACCTCCAGTTGGTGCAATTGAAGAGATTGATAAGGTTATTGTTGAAGCCTTTAAGATGGTGAATGCAGATGACAAGAAGACAGTTAAAGAAGACGAGTTCAAGAAAATTTTAACCGAAATACTGGGGAGTATCATGTTGCAGTTAGAGGGCAATCCCATATCTGTTTCTTCAAATTCAGTTGTGCATGAGCCTTTAGGCTCATCTTCTACACTCTTGCAGCCATCTTCTAGTTGA 1101 0.4242 MEESKSRKNGGKGEIMDGSKIMELVGNEQVFSNFVDHKFDELDKDRDGKLSMKELEPAVADIGAGLGLPAQGTSPDSDHIYFEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKQDPIVILRMDGEDLLEFVNGPSYEAEMASIFSQIESPSGSLREHVIEAFGRLTVDQGIPPTSDSWVFNNIVDPALSQAGLSLDKPAAQETFLEEFKKVALSVVDFLKEKPAIVAHSENTFDGRGVKRLLSNKFELDRTLNLALENLPKDCNGKISKDYLRVALDLVSPSAGLPPVGAIEEIDKVIVEAFKMVNADDKKTVKEDEFKKILTEILGSIMLQLEGNPISVSSNSVVHEPLGSSSTLLQPSSS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0064 366 ProSitePatterns EF-hand calcium-binding domain. 43 55 IPR018247 -
Aed9g0064 366 ProSiteProfiles EF-hand calcium-binding domain profile. 297 332 IPR002048 GO:0005509
Aed9g0064 366 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 6 365 - -
Aed9g0064 366 SMART efh_1 255 283 IPR002048 GO:0005509
Aed9g0064 366 SMART efh_1 301 329 IPR002048 GO:0005509
Aed9g0064 366 SMART efh_1 34 62 IPR002048 GO:0005509
Aed9g0064 366 SUPERFAMILY EF-hand 38 340 IPR011992 -
Aed9g0064 366 ProSiteProfiles EF-hand calcium-binding domain profile. 30 65 IPR002048 GO:0005509
Aed9g0064 366 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 6 365 - -
Aed9g0064 366 Pfam EF-hand domain pair 38 104 IPR002048 GO:0005509
Aed9g0064 366 Gene3D - 12 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0064 Aed-Chr9 423894 429029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0064 5 366 EF-hand Containing Proteins AT4G38810 64.754 1.62e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0064 - - gmx:100787083 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0064 9 423894 429029 Aed9g0064 9 423894 429029 ECH