Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0052 ATGTCGAGCATCGTCAAGGAGATCCTGGCGAGCCCGATACAAATGGCGGACCAGGTATCGAAGCTGGCGGAGGAGGCCCAGAATTTCCGACAGGAATGTCTTGAGCTGAAATCGAAGACGGAGAAGCTGGCGGGGCTCCTCCGCCAGGCTGCGAGGAACAGCAATGATCTCTACGAGCGTCCAACGCGGCGCATCATCGACGACACTGAGCAAGTCCTCGACAAGGCCCTCGTACTCGTCACCAAATGCCGCGCCAACAGCCTCATCAAAAAACTCTTCACTATCATTCCCGCCACCGCCTTCCGCAAGACCTCCATGCAGCTCGAGAATTCCGTTGGCGACGTCCAGTGGCTCCTCCGCGTCTCCGCCTCCGCCGACGAGCGCGACGACGAGTACTTGGGCCTCCCTCCCATCGCCGCCAACGAGCCCATCCTCTGCCTGATTTGGGAACAGGTGGCCATTCTTCTCTCCGCCGTTTCCTTGGAAGAGCGTTCCGATGCTGCCGCCTCCTTGGTTTCTCTCGCTCGCGACAACGACCGTTACGGTAAACTCATCATCGAAGAAGGAGGCGTCCCTCCTCTCTTGAAGCTTCTGAAGGAAGGACGACTGGACGGTCAGGAAAACGCTGCCAGAGCCATCGGCTTGCTCGGGAAAGATCCTGAAAGCGTGGAACACATTGTAAACGCTGGTGTCTGTTCCGTGTTTGCCAAAGTCCTGAAAGAAGGTCACATGAAGGTTCAGACGGTGGTGGCATGGGCTATTTCTGAACTCGCCGCGAATCACCCCAAATGCCAGGATCATTTCTCCCAGAACAACGCCATACGCTTGCTCGTCAGCCATCTCGCCTTTGAGACAATTCAAGAACACAGCAAGTACAGCATTGCCAACAAACACAAGTCGATTCACTCCGTTTTTCTCGCGAGTAATACAACTGGCGTCCACGAGGAGGAGGATGATAAACAAGTTGCCAACCCCATTTCGATGCAGACAGGAGGCACTCAGATGCACAACGTGGTTTCCAACACAATGGCCATTAAGGGCGTCGGGGAGGATGACAAAACCAACCCCAAAAAACAACAACAACAGCAACAGCAACAAAACAGTGGGAATTCGCAGCACTTGTCAATTGCCGGCACGAGTATTAAGGGTAGAGAGTTTGAAGACTCGGTGACAAAGGATCAGATGAAGGCCATGGCAGCTAGAGCCTTATGGCAACTCTCCAGGGGAAACCTGACCGTGTGTCGGAACATAACCGAGTCAAGGGCTCTTCTATGTTTCGCAGTTCTGTTGGAAAAAGGACCCGAAGATGTTCAATCTTATTCGGCAATGGCTTTGATGGAAATCACAGCTGTGTCGGAGCAGCATTCGGAGCTTAGACGCTCTGCTTTCAAACCAACCTCCCCTGCTGCCAAGGCTGTTGTGGAACAGCTCCTTAAAATAATCGAAAAAGAAGTAGAAGACCTGCTTATACCATGCATCAGAGCGGTTGGTAATCTGGCTAGGACATTTAGAGCGACTGAAACAAGACTTGTTGGGCCATTGGTGAAGCTTCTTGACGAAAGAGAGGCGCATGTTTGCATGGAAGCGGCCATTGCTCTAAACAAATTTGCTTGCACTGACAACTACCTTCATGAGAACCACTGCAACGCCATAATAGAATCAGGGGGAGCCAAACACTTGATTCAACTGGTTTACTTTGGGGAGCAAATAGTTCAGATTCCTTCCGTTACTCTGCTTTGTTACATAGCGCTGCACGTCCCCAAAAGCGAGACGCTGGCGCAAGAAGAGGTGCTCATTGTTCTCGAGTGGTGCACCAAGCAGGCACACCTCATCGAAGAACCCTCCATCGAACCACTGTTACCAGAAGCCAAGAGCAGGCTCGAACTCTATCAATCAAGAGGAAGAGGATTCCGCTGA 1917 0.5222 MSSIVKEILASPIQMADQVSKLAEEAQNFRQECLELKSKTEKLAGLLRQAARNSNDLYERPTRRIIDDTEQVLDKALVLVTKCRANSLIKKLFTIIPATAFRKTSMQLENSVGDVQWLLRVSASADERDDEYLGLPPIAANEPILCLIWEQVAILLSAVSLEERSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGRLDGQENAARAIGLLGKDPESVEHIVNAGVCSVFAKVLKEGHMKVQTVVAWAISELAANHPKCQDHFSQNNAIRLLVSHLAFETIQEHSKYSIANKHKSIHSVFLASNTTGVHEEEDDKQVANPISMQTGGTQMHNVVSNTMAIKGVGEDDKTNPKKQQQQQQQQNSGNSQHLSIAGTSIKGREFEDSVTKDQMKAMAARALWQLSRGNLTVCRNITESRALLCFAVLLEKGPEDVQSYSAMALMEITAVSEQHSELRRSAFKPTSPAAKAVVEQLLKIIEKEVEDLLIPCIRAVGNLARTFRATETRLVGPLVKLLDEREAHVCMEAAIALNKFACTDNYLHENHCNAIIESGGAKHLIQLVYFGEQIVQIPSVTLLCYIALHVPKSETLAQEEVLIVLEWCTKQAHLIEEPSIEPLLPEAKSRLELYQSRGRGFR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0052 638 Gene3D - 151 311 IPR011989 -
Aed9g0052 638 Gene3D - 373 623 IPR011989 -
Aed9g0052 638 Coils Coil 19 39 - -
Aed9g0052 638 PANTHER ARMADILLO REPEAT ONLY 4 1 637 - -
Aed9g0052 638 SMART arm_5 177 218 IPR000225 GO:0005515
Aed9g0052 638 SMART arm_5 219 259 IPR000225 GO:0005515
Aed9g0052 638 SMART arm_5 466 501 IPR000225 GO:0005515
Aed9g0052 638 SMART arm_5 410 450 IPR000225 GO:0005515
Aed9g0052 638 SMART arm_5 544 584 IPR000225 GO:0005515
Aed9g0052 638 Gene3D - 3 121 IPR036537 GO:0007166
Aed9g0052 638 SUPERFAMILY ARM repeat 155 604 IPR016024 -
Aed9g0052 638 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Aed9g0052 638 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Aed9g0052 638 MobiDBLite consensus disorder prediction 358 374 - -
Aed9g0052 638 PANTHER ARMADILLO REPEAT ONLY 1 1 637 - -
Aed9g0052 638 MobiDBLite consensus disorder prediction 348 374 - -
Aed9g0052 638 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0052 Aed-Chr9 376747 378663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0052 - - gmx:100807066 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0052 9 376747 378663 Aed9g0052 9 376747 378663 ECH