Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0048 ATGATAAGGACCACCCTGGAAGCGGAGAAAGAGACACATGACTGCATTGGGACAGTTTCGGCCAAGCATGGATGCTGGTCATTTCTCAAGGGTGGATTTGTTCTCAATTGGCCTTCAAATTTATCCACAATCTATTTCCAGAACGCTGATGGTAAAGATATCAATATAGATGTTGCTAGCCCATCACTCCAGCCATTTTCTAAGCAACAATGGAGAATCAATCAACAGTATATAATCAATACCCAAAGAAAGCGTGCCGTCACTATTCATGTGTCAGATAGTAACGGAAGAAGATTGCAAGGAGCTTCCATCCGTGTAGAGCAAATCTCAAAAGACTTCCCTTTCGGATCTGCAATAGCAAAGACCATTCTTGGCAACGAACCCTATCAGTTACAATCTGCTGTGAATTTTCGAATACACAGTCTGATGAGCCAATACAAAGAGGAGTTCATACACTGGGACGTGAGCAATGAAATGCTTCATTTTGATTTCTACGAGGAAAAGCTTGGAGCTGATGCCACATTGCATTTCTTCAAGACAGCACATGAATCAGATCCATTAGCAACACTGTTTATGAATGAGTTTAATGTGGTGGAAACATGCAGTGATGTAAATTCAACAGTGGACGCGTATATATCACGGGTAAGAGAACTGGAACGAAATGGGATATTTATGGATGGAATTGGGTTGGAGGGACACTTCACAATACCAAATCCTCCACTTATGAGAGGCATCCTAGACAAGTTGGCAACACTTGGACTTCCAATTTGGCTGACTGAGGTTGATATAAGCAAGACACTTGATAGAGATGCACAGGCAAATCATTTGGAGGAAGTGCTGAGGGAAGGTTTCTCACATCCTTCTGTCAATGGGATAATGCTTTGGACGGCATTTCATTCAAATGGCTGCTACCAAATGTGTCTCACAGACAATAATTTCAATAACCTGCCAGCAGGTGATGTGCTCGACAAACTTGTTCTTCAAGAATGGCAAACCGGTCGTGTAGAGGGAGTCGCAGATGTGCATGCTTCTTATAGCTTTTATGGCTTCTTAGGAGAATATACAATTACTGTCAACTATGCCAATAGGACTACAAACTCAACTTTCAACCTCTCTCCAGGTCATGAAACCAGACATTTCACTATTACACTTTGA 1155 0.419 MIRTTLEAEKETHDCIGTVSAKHGCWSFLKGGFVLNWPSNLSTIYFQNADGKDINIDVASPSLQPFSKQQWRINQQYIINTQRKRAVTIHVSDSNGRRLQGASIRVEQISKDFPFGSAIAKTILGNEPYQLQSAVNFRIHSLMSQYKEEFIHWDVSNEMLHFDFYEEKLGADATLHFFKTAHESDPLATLFMNEFNVVETCSDVNSTVDAYISRVRELERNGIFMDGIGLEGHFTIPNPPLMRGILDKLATLGLPIWLTEVDISKTLDRDAQANHLEEVLREGFSHPSVNGIMLWTAFHSNGCYQMCLTDNNFNNLPAGDVLDKLVLQEWQTGRVEGVADVHASYSFYGFLGEYTITVNYANRTTNSTFNLSPGHETRHFTITL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0048 384 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 72 325 IPR001000 GO:0004553|GO:0005975
Aed9g0048 384 SUPERFAMILY (Trans)glycosidases 98 332 IPR017853 -
Aed9g0048 384 SMART glyco_10 102 325 IPR001000 GO:0004553|GO:0005975
Aed9g0048 384 PANTHER GLYCOSYL HYDROLASE 2 130 IPR044846 GO:0004553|GO:0005975
Aed9g0048 384 PANTHER GLYCOSYL HYDROLASE 130 383 IPR044846 GO:0004553|GO:0005975
Aed9g0048 384 Pfam Glycosyl hydrolase family 10 130 297 IPR001000 GO:0004553|GO:0005975
Aed9g0048 384 Gene3D Glycosidases 116 335 - -
Aed9g0048 384 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 2 130 - -
Aed9g0048 384 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 130 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0048 Aed-Chr9 352303 359837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0048 131 384 Glycoside Hydrolase AT4G38650 67.059 6.01e-122 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0048 - - gmx:100793558 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0048 9 352303 359837 Aed9g0048 9 352303 359837 ECH