Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0045 ATGGCGATGGCTTTCAAGATGGCGACGACTGGAATGTGTGTTACAGATGAGTGCAAGAAGTCGTTCATGGATATGAAATGGAAGAAGGAGCACAGATTCATAGTGTTCAAGATCGACGAAGGATCAAGGCTCGTCACCGTTGATAAACTCGGAGGCCCCACTGACGGCTATGATGATCTCACCGCCTCCCTGCCCACCGATGATTGTCGATACGCCGTTTTTGACTTCGATTTCGTCACTGTTGATAACTGCCGCAAGAGCAAGATCTTCTTCATTGCATGGTCTCCAACAGCATCAAGGATTAGAGCAAAGATTCTATACGCAACTTCCAAGGATGGGCTGAGAAGAGCGCTTGACGGAATCAGCTATGAACTCCAGGCCACCGATCCAACTGAGATGGGTTTCGATGTAATTAGAGACATAGCCAAATAG 432 0.4769 MAMAFKMATTGMCVTDECKKSFMDMKWKKEHRFIVFKIDEGSRLVTVDKLGGPTDGYDDLTASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0045 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 139 IPR002108 GO:0003779
Aed9g0045 143 PANTHER ACTIN-DEPOLYMERIZING FACTOR 5-LIKE 1 143 - -
Aed9g0045 143 Gene3D Severin 2 143 IPR029006 -
Aed9g0045 143 SMART adf_2 16 143 IPR002108 GO:0003779
Aed9g0045 143 SUPERFAMILY Actin depolymerizing proteins 6 140 - -
Aed9g0045 143 PANTHER COFILIN-RELATED 1 143 IPR017904 GO:0015629|GO:0030042
Aed9g0045 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Aed9g0045 143 CDD ADF_cofilin_like 10 140 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0045 Aed-Chr9 328742 330291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0045 K05765 - gmx:100785493 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0045 9 328742 330291 Aed9g0045 9 328742 330291 ECH