Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0041 ATGGAAACTCGGAGTCGCAAGCGGGCGGAGGCATCCTCAGCTGCCCCTTCATCCTCGTCCACCACCACCACTCGTTCCGCAAAGCGCTCTCGTCTTTCTTCTTCTTCTTCTTCTTCGATCCCTAACACAACAACATCAACAACTGTTAATACCCGTTCTCGTTTGACCAGGAATAACCACAACAACTCCGCTTCTCTAATGGACCCCACCAATGAATCCTCTGGGTCGAGACGTGATCGCCGTGGCAATAGGGACAATTCGGATAAAGGGAAGGAGAAGGAACAGGATGTTAGGATTAGGGAGCTAGAACGAGAACGAGAGCGAGCCTTGGCCTTGAACATGGAGAGTGAAGATGCTGGGGATGATGATGATAATGATAGCGAGGGTGGTGTCGGAATTCTACACCAGAATTTGACTTCTGCCAGCAGTGCTCTTCAAGGCCTTCTTCGTAAACTTGGTGCTGGTTTGGATGATTTGCTTCCTGCTACGGCTATGGCCGGTTCTGCATCATCTTCTCACCAGAGTGGCAGACTCAAGAAGATTTTGTCTGGTTTGCGTGCCGATGGGGAAGAAGGTCGTCAGGTTGAGGCATTGACGCAGCTTTGTGACATGCTCTCCATTGGCACCGAAGAATCCCTTAGTACATTTTCGGTTGACTCATTTGTTCCCGTGCTAGTGGGCTTGCTTAATCATGAGACCAATCCCGATGTTATGCTTCTTGCCGCTAGGGCACTAACCCATTTGTGTGATGTTCTTCCTTCATCCTGTGCTGCTGTTGTGCATTATGGTGCAGTCTCTATCTTCTGTGCCAGGCTGCTTACCATAGAGTACATGGACTTGGCTGAGCAGTCTCTTCAAGCACTAAAGAAAATATCTCAGGAGCACCCAACTGCCTGTCTTCGAGCTGGAGCTCTGATGGCTGTACTTTCATACTTGGACTTCTTCTCAACAGGAGTTCAGCGGGTGGCATTGTCTACTGCTGCAAATATGTGCAAGAAGCTTCCTCCTGATGCAGCTGACTTTGTGATGGAAGCTGTTCCTCTTTTGACAAATCTCCTTCAGTACCACGACTCCAAGGTCCTGGAACATGCCTCTGTTAGTTTGACCCGAATAGCTGAAGCATTTGCATCATCGCAAGACAAATTAGATGAATTGTGCAATCATGGACTGGTAACACAAGCCGCCTCTCTCATTTCTACCAGCAGTTCTGGAGGTGGACAGGCTTCTCTCAGCACTCCAACATATACTGGTTTGATCCACCTTCTTTCCACATGTGCAAGTGGGTCTCCTCTTGGAGCTAAAACGTTGCTTCTCCTTGGAATTAGTGGCATTCTTAAAGATATACTATCCGGTTCTGGTGTTTCTTCTAACACCTCTGTTTCACCTGCATTGAGTAGGCCAGCAGATCAGGTATGA 1416 0.4838 METRSRKRAEASSAAPSSSSTTTTRSAKRSRLSSSSSSSIPNTTTSTTVNTRSRLTRNNHNNSASLMDPTNESSGSRRDRRGNRDNSDKGKEKEQDVRIRELERERERALALNMESEDAGDDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPATAMAGSASSSHQSGRLKKILSGLRADGEEGRQVEALTQLCDMLSIGTEESLSTFSVDSFVPVLVGLLNHETNPDVMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPPDAADFVMEAVPLLTNLLQYHDSKVLEHASVSLTRIAEAFASSQDKLDELCNHGLVTQAASLISTSSSGGGQASLSTPTYTGLIHLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSNTSVSPALSRPADQV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0041 471 Gene3D - 166 465 IPR011989 -
Aed9g0041 471 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 49 471 - -
Aed9g0041 471 SUPERFAMILY ARM repeat 177 451 IPR016024 -
Aed9g0041 471 Coils Coil 92 119 - -
Aed9g0041 471 MobiDBLite consensus disorder prediction 1 133 - -
Aed9g0041 471 MobiDBLite consensus disorder prediction 73 115 - -
Aed9g0041 471 MobiDBLite consensus disorder prediction 10 72 - -
Aed9g0041 471 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 49 471 IPR045322 GO:0006511|GO:0061630
Aed9g0041 471 MobiDBLite consensus disorder prediction 452 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0041 Aed-Chr9 268952 279720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0041 K10590 - gmx:100791450 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0041 9 268952 279720 Aed9g0041 9 268952 279720 ECH