Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0040 GCATCTTCTTCCTTTACCTGTGGAGGGGGATCCCCGGTGTTGGCTCAATATATATATTGGACTCAGAACTCAGTTCTGGGCCCAAGAAAATTAAAAAATAAAAAGATGGATCGGAACATGTCTCGCGCCGTTCTTATAATTTGCATCAGCCTGGTTTCCATAGCCGTTGGTGCCAGTGCTAAACATGGGCATCACATGAACCCTCAAAACGTGACTTACGATGGCAAGTCACTGTTCGTGAACGGAAGGCGCGAGATGCTGTTTTCCGGTTCCATCCATTACACACGAAGCACCCCAGACATGTGGCCTGTGCTTCTTGATAATGCGAGGCGTGGAGGCTTGAACGTGATTCAAACATACGTGTTCTGGAACGCCCACGAAGCAGAGCAAGGAAAGTTCAACTTCGAAGGCAACTACGATCTGGTGAAGTTCATTAAGCTGGTTCAAGCCAGCGGAATGTTTGTTACTCTAAGGGTTGGGCCTTTCATCCAAGCCGAGTGGAACCACGGAGGTCTTCCCTATTGGCTTAGGGAGGTCCCCGGTATAAGATTCCGGTCAGACAATGAGCCCTACAAGTTTCACATGAAAGCATTCGTGACAAAGATTATACAAATGATGAAGGATGAGAAGCTGTTTGCTCCACAAGGAGGTCCCATCATCTTGGCCCAGATTGAGAACGAGTACAACCACATCCAGCTTGCATACAGACAGTTGGGAGATAGTTACGTACAATGGGCGGCGAAAATGGCCGTGGCAACCGATGTTGGTGTTCCATGGCTGATGTGCAAGCAGAGGGATGCACCTGACCCAGTTATCAACGCATGCAATGGGAGACACTGTGGTGATACCTTCGCAGGGCCAAACAAGCCATACAAGCCATCCATATGGACCGAGAACTGGACCGCTCAGTACAGATCACATGGAGATCCACCTTCCCAGAGATCAGCTGAAGACATTGCTTTCTCCGTTGCCCGTTTCTTCTCTAAGAATGGTAATTTGGTTAACTACTATATGTACCATGGTGGAACTAACTTTGGGAGGACAAGCTCTATTTTTACCACAACCCGTTATTACGACGAGGCACCTCTTGACGAATACGGTCTTCCCAGAGAACCTAAATGGAGTCACTTGAGGGACATCCACAAAGCTTTGCTCCTTTGCAGGAAGGCTATCCTTGGTGGCATTCTCGGTGTCCAAAAATTGAACGATATTCATGAGGTTAGAACCTTTGAGAGGCCTGGAACTAATATGTGTGTTGCTTTCATCACCAACAACCACACCATGGAGTCAGCCATCATTAACTTCAGAGGCACTGACTACTATTTGCCTCCACATTCCATCAGCATCCTCCCTGATTGCAAGACCGTCGTATACAACACCCAAAGTATTGTTTCACAACATAATTCAAGGAACTACGAGAGGTCAACCGCGGCAAACAATTTCCACTGGGAGATGTTTAATGAGGCTATTCCAACTAACAAGAAAATGGATCTTTACGACCATGCTCCTCTTGAGCTTTACCACTTGCTTAAGGACAGATCCGATTATGCTTGGTTCACCACCACCTTCGAGTTGACCCCAGATGCCTTGCCAACCAACCCTGGGGTACTCCCACTTCTTCGTGTTTTCAGTCTCGGGCATTCAATGGTTGCATTTGTCAACGGAGATTTTGTTGGAACTGCTCATGGTAACCACGAGGAAAAATCTTTTGACTTCCAGCAACCCGCGGCGTTCAGGGTTGGAACCAACTACGTTTCCTTGTTGTGTAGCACAGTTGGACTACCCGACAGTGGATCTTACATGGAAAATAGGTTCGCAGGACCCGAATCCATATTTATCTTGGGTCTCAACAACGGCCGAGTACTTAATATTAGTGGCATTGTCTGGGGCCATCGGGTTGGTCTTAAGGGTGAGGGCAGGAAAGTTTTCAGTGAGGAAGGAGCCTTGAAGACAAAGTGGAAGCCACTGGGTGCAGTTCCAAGGCCTCTAACATGGTACAAGACTAGATTTGTGACCCCAGAGGGAACAGGTCCTGTTGCGATAAGGATGAATGGTATGGGAAAGGGAATGGTGTGGGTGAACGGTAACAACATTGGTCGTTACTGGATGAGTTTCCTGTCAAAATTCGGAAAGCCAACTCAATCAGAGTTCCACATCCCAAGATCATACCTGAATCCACAAGACAACTTGCTAGTTATATTTGAAGAGGCGGGTCTAGGTCCACAACAGGTTGAGATCCTGAATGTGAACAGAGACACAATATGCAGTATGGTTGCAGAGAACGATCCAGCTAATGTGAATTCATGGGTTTCAAGGAGGGGGAACTTCCATCCTGTAGTGAGAGATCTTGGACCAGCAGCGTCACTCGTCTGTTCAACAGGGAAGAAGATTGTTGCTGTGGAATTTGCAAGCTTCGGTAACCCCACTGGCTATTGTGGTGAATTTGTTATGGGAAACTGCAATGTTGCTGCCACCAAGCAAATCGTTGAGCAACAATGTTTGGGCCAAGAAACATGCAAAGTTCCATTGAACCGCGCAGTCTTCAACCAGAATGGCGTCGATGCTTGTCCAGATTTGATGGTCAAGAAGCTTGCTATCCAACTTAGGTGTGCCTAA 2616 0.4725 ASSSFTCGGGSPVLAQYIYWTQNSVLGPRKLKNKKMDRNMSRAVLIICISLVSIAVGASAKHGHHMNPQNVTYDGKSLFVNGRREMLFSGSIHYTRSTPDMWPVLLDNARRGGLNVIQTYVFWNAHEAEQGKFNFEGNYDLVKFIKLVQASGMFVTLRVGPFIQAEWNHGGLPYWLREVPGIRFRSDNEPYKFHMKAFVTKIIQMMKDEKLFAPQGGPIILAQIENEYNHIQLAYRQLGDSYVQWAAKMAVATDVGVPWLMCKQRDAPDPVINACNGRHCGDTFAGPNKPYKPSIWTENWTAQYRSHGDPPSQRSAEDIAFSVARFFSKNGNLVNYYMYHGGTNFGRTSSIFTTTRYYDEAPLDEYGLPREPKWSHLRDIHKALLLCRKAILGGILGVQKLNDIHEVRTFERPGTNMCVAFITNNHTMESAIINFRGTDYYLPPHSISILPDCKTVVYNTQSIVSQHNSRNYERSTAANNFHWEMFNEAIPTNKKMDLYDHAPLELYHLLKDRSDYAWFTTTFELTPDALPTNPGVLPLLRVFSLGHSMVAFVNGDFVGTAHGNHEEKSFDFQQPAAFRVGTNYVSLLCSTVGLPDSGSYMENRFAGPESIFILGLNNGRVLNISGIVWGHRVGLKGEGRKVFSEEGALKTKWKPLGAVPRPLTWYKTRFVTPEGTGPVAIRMNGMGKGMVWVNGNNIGRYWMSFLSKFGKPTQSEFHIPRSYLNPQDNLLVIFEEAGLGPQQVEILNVNRDTICSMVAENDPANVNSWVSRRGNFHPVVRDLGPAASLVCSTGKKIVAVEFASFGNPTGYCGEFVMGNCNVAATKQIVEQQCLGQETCKVPLNRAVFNQNGVDACPDLMVKKLAIQLRCA 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0040 871 Pfam Glycosyl hydrolases family 35 77 383 IPR031330 -
Aed9g0040 871 Gene3D Glycosidases 68 386 - -
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 295 310 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 157 176 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 351 367 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 214 229 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 688 704 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 81 98 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 102 120 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 332 347 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 PRINTS Glycosyl hydrolase family 35 signature 661 675 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 ProSiteProfiles SUEL-type lectin domain profile. 781 871 IPR000922 GO:0030246
Aed9g0040 871 PANTHER BETA-GALACTOSIDASE RELATED 47 860 IPR001944 GO:0004553|GO:0005975
Aed9g0040 871 SUPERFAMILY Galactose-binding domain-like 447 607 IPR008979 -
Aed9g0040 871 Pfam Beta-galactosidase jelly roll domain 664 733 IPR025300 -
Aed9g0040 871 SUPERFAMILY (Trans)glycosidases 67 387 IPR017853 -
Aed9g0040 871 Pfam Galactose binding lectin domain 789 870 IPR000922 GO:0030246
Aed9g0040 871 Gene3D - 454 628 - -
Aed9g0040 871 Gene3D - 642 760 - -
Aed9g0040 871 Pfam Beta-sandwich domain in beta galactosidase 398 462 IPR041392 -
Aed9g0040 871 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 216 228 IPR019801 GO:0004553|GO:0005975
Aed9g0040 871 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 47 860 - -
Aed9g0040 871 SUPERFAMILY Galactose-binding domain-like 629 775 IPR008979 -
Aed9g0040 871 Gene3D - 783 871 IPR043159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0040 Aed-Chr9 264878 268031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0040 71 871 Glycoside Hydrolase AT2G16730 56.663 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0040 - - gmx:100791456 1434.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0040 9 264878 268031 Aed9g0040 9 264878 268031 ECH