Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0023 ATGACGATCCATTCGATCGTGATACAGAAGCTGCTGAGCACGAATGCTCATGTGGGTAGGCGAGTTGCCGGTCACCATTTGAAGGAGTACACGTATGGGTTCCGCAACAAAATGGCGATAATGGATTCCGATAGAACACTGATTTGTATGCGCAGTGCCTGCAACTTCATGGCCTCCCTTGCCCGAGAAAACGGTCGCTTCATGTTCATTAACACAAACCCTCTCTTGGACGACATTTTCGACCTCATGACCAAGAAGGTAGGCTCCTACAGCCCCTCCACCAGCTCTCTCTGGCGCACCGGCGGCTTCCTCACCAACAGCTACAGCCCCAAGAAGTTCCGCTCTCGCAACAAAAAGCTTGTCTTTGGCCCCACCCAGCCTCCCGATTGCATCGTCATTGTCGACACTGACCGTAAGTCTTCTGTTATCAACGAGGCTTTCAAGCTTCAAATCCCCATTGTCGCTCTCGTCGATTCCGCCATGCCCCTCGATGTTTATAACCGCATTGCCTATCCTGTTCCCGCCAATGATTCTGTTCAATTCGTTTATTTGTTCTGTAATTTGATCACCAAAACATTGCTTCGTGAGAAGACCAACTCTGCTGCTGCTCTTCCCACTATTGATTCTCGAGAAGAAGCTACGCGCAAGACCAAGACCGATTTCGATAAACTCAGCATCGCCGTTCTTCCCTATGACAGTTTATCTCCCTTACCTCAAGATATAGAGGAAACTAAGAAGCTTTTGGACAAGCTTGTTGTTTTGAAGTTCGATGGTTCCCTAGAAAGAAATATGGGTTTTGATGGTCCCAAACCCTCAACTCCAAGTATGGTAGCAGGGTGCCATTGCTTCTTTTCAACAAAGATGACATTCATGATAGTTTTGGAGAAGTATTCAAAGTCAAGCATTGAAGTGCACACTTTTAAACAGGGTGAAGATCGAGAGTTGAAATCATCGGGTGGATGTGGCAGCAAGGAGGAAGTGCATCCATTTGATGATGTTGATGTGTTCTGTTCACTAATGACTGGTGGAACCCTTGATTCGTTATTATCACAGGGTAAGGAGTATATCCTAGTGTTGAAGTCAGACAATGTGGCAACAATACTTGATCCAAACATACTAAATCATTTGATGATAAATGATATTGAATATTGCATGGAGGTGACACCAAGCAATTCGTATAATTTAATCTTACCCACAATGAAATTTAAGCTTCGGGAGATTGCTCGAGACCAAGATAAACATTTGAAGGACAGTTTCAAACTCATTGATACAACAAACATGTGGGTGAGTTTAAGAGCCATCAAGAGGTTTGTTGACACTCATGAAGTAAGGAACAAGAAGCCCTCAGTTTTGAAGGACACAGCAGCTGGACCAGCTATAAAGTTCTTTGATAATGTAATTGGTGTCTCTGTGCCTGAATCTCGCTTTCTTCCCTTGAATGCAACATCAGATCTATTACTTCTTCAGTCAGATTTATACACTTGTAGAGAAGGTGCTTTAACTCGTAATCCAGTTAGAACTAACCCTTTAAATCCTGCAATAGACTTGGGACCTGAATTTGAGAAGGTTGGTGACTTCCAAAATCGCTTTAGATCCATTCCAAGCATCATTGAGTTGGATAGTTTGATGGTGAGAGGTGATGTGTGGTTTGGAGCTAATATCACTTTGAAGGGGCAAGTGACTATTGCTGCAAAAGCTGGCTTGAAATTGGAAATTCCAGATGGGGCGACAATTGAGAATAAGGAGATCAATGACCCTGCAGATATCTGA 1770 0.4373 MTIHSIVIQKLLSTNAHVGRRVAGHHLKEYTYGFRNKMAIMDSDRTLICMRSACNFMASLARENGRFMFINTNPLLDDIFDLMTKKVGSYSPSTSSLWRTGGFLTNSYSPKKFRSRNKKLVFGPTQPPDCIVIVDTDRKSSVINEAFKLQIPIVALVDSAMPLDVYNRIAYPVPANDSVQFVYLFCNLITKTLLREKTNSAAALPTIDSREEATRKTKTDFDKLSIAVLPYDSLSPLPQDIEETKKLLDKLVVLKFDGSLERNMGFDGPKPSTPSMVAGCHCFFSTKMTFMIVLEKYSKSSIEVHTFKQGEDRELKSSGGCGSKEEVHPFDDVDVFCSLMTGGTLDSLLSQGKEYILVLKSDNVATILDPNILNHLMINDIEYCMEVTPSNSYNLILPTMKFKLREIARDQDKHLKDSFKLIDTTNMWVSLRAIKRFVDTHEVRNKKPSVLKDTAAGPAIKFFDNVIGVSVPESRFLPLNATSDLLLLQSDLYTCREGALTRNPVRTNPLNPAIDLGPEFEKVGDFQNRFRSIPSIIELDSLMVRGDVWFGANITLKGQVTIAAKAGLKLEIPDGATIENKEINDPADI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0023 589 Gene3D Hexapeptide repeat proteins 480 589 - -
Aed9g0023 589 Pfam Ribosomal protein S2 125 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 Pfam Ribosomal protein S2 11 108 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 ProSitePatterns Ribosomal protein S2 signature 1. 8 19 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 PRINTS Ribosomal protein S2 signature 169 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 SUPERFAMILY Ribosomal protein S2 8 199 IPR023591 -
Aed9g0023 589 Pfam UTP--glucose-1-phosphate uridylyltransferase 284 557 IPR002618 GO:0070569
Aed9g0023 589 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 282 479 IPR029044 -
Aed9g0023 589 CDD RPS2 11 195 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed9g0023 589 Gene3D - 9 223 - -
Aed9g0023 589 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 270 - -
Aed9g0023 589 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 290 589 - -
Aed9g0023 589 PANTHER - 1 270 IPR016267 GO:0003983|GO:0006011
Aed9g0023 589 PANTHER - 290 589 IPR016267 GO:0003983|GO:0006011
Aed9g0023 589 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 565 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0023 Aed-Chr9 157137 165058 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0023 K00963 - gmx:100812583 955.666