Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0009 ATGGAGAACAGGGTAATATTACAGGAATGGTTTGACCGCGTTGACTCGGAGAAAAGTGGAAGCATAACAGCGGTGCAGCTGAAGACAGCTCTAGCTGTGGGCAACCTAGAATTTCCGCTCTCAGTGGTTCAGCAAATGATCAGGATGTACGATTTTGACAGGAATGGTACCATGAGCTTTCAAGAATTTGTTGCACTCAACAAGTTCCTTCTTAAGGTTCAACATGCATTTTCTGATCTAGAGAGGGGTCGTGATTTTCTTGTACCTGATGATGTATTTGAGGCTTTGCTAAAAATTGGTTTCATGCTGGATTCTCCTGCTTTTTACTCTGTCTGTGAGAGCTTCGATCAAAGTAAAAATGGGAGGTTTCGGCTGGATGACTTAATATCAATCTGTATATTCTTACAGTCAGCACGGAACCTGTTTAATTCCTTTGATACAGCAAAACAAGGCAGAGTTACTCTTGATCTGAATCAATTTGTCTATTGTAGTAAGTACAGCTGA 504 0.4107 MENRVILQEWFDRVDSEKSGSITAVQLKTALAVGNLEFPLSVVQQMIRMYDFDRNGTMSFQEFVALNKFLLKVQHAFSDLERGRDFLVPDDVFEALLKIGFMLDSPAFYSVCESFDQSKNGRFRLDDLISICIFLQSARNLFNSFDTAKQGRVTLDLNQFVYCSKYS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0009 167 Pfam EF hand 43 66 IPR002048 GO:0005509
Aed9g0009 167 PANTHER PEFLIN 6 164 - -
Aed9g0009 167 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Aed9g0009 167 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
Aed9g0009 167 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
Aed9g0009 167 SMART efh_1 6 34 IPR002048 GO:0005509
Aed9g0009 167 SMART efh_1 42 70 IPR002048 GO:0005509
Aed9g0009 167 PANTHER PEFLIN 6 164 - -
Aed9g0009 167 Gene3D - 1 165 - -
Aed9g0009 167 SUPERFAMILY EF-hand 6 163 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0009 7 128 EF-hand Containing Proteins AT4G04740 26.562 5.83e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0009 - - gmx:100792880 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0009 9 84628 86663 Aed9g0009 9 84628 86663 ECH