Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0001 ATGACTGTTTCTTTCCATAAATTCGGTGACTATTTTCCTGGTACTGGGGATGTACGTGATATTGGATATGGAAAAGGAAAATATTACTCTCTTAATGTTCCACTTGATGATGGCATTGATGATGAGAGCTATCATTTTTTGTTCAAACCAATAATTGGCAAAGTAATGGAAGTGTTCAGGCCTGGTGCAGTAGTTCTCCAGTGCGGTGCTGATTCTTTATCTGGAGATCGATTGGGATGTTTCAATCTTTCAATTAGGGGTCATGCTGAGTGTGTCAAATACATGAGATCATTCAATGTGCCCCTCTTGCTACTAGGTGGTGGTGGCTACACCATTCGGAATGTTGCTCGTTGTTGGTGCTATGAGACAGGAGTTGCTCTTGGAATAGAAGTTGATGACAAAATGCCGCAGCACGAGTATTATGAATATTTTGGTCCAGATTATACCCTTCATGTTGCCCCAAGTAACATGGAAAACAAGAATTCCCGTCATTTACTTGAAGAAATTCGATCTAAGCTACTTGAGAATCTTTCAAAGCTGCAGCATGCTCCCAGTGTCCAATTTCAGGAAAGACCTCCTGATTCTGATCTTGGAGAGGCCGATGAAGATCATGATGGCGATGAGCCATGTGATCCAGATTCTGAGATGGACATTGACATCGAATGTGAGCTTGTCTCAAGCAAAGTAAAGAAAGAAATTGCTGAACCTCAGCCCAATGATCTGGCTCTAGATATTTCTTCTCAGAAAGCTGACGAAGATAACGTGAAAGTAGAACAGAATACTGTGAATGATTTGGCAAAAGAGACGGACCTGAAGTGTTAA 822 0.4136 MTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRHLLEEIRSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDGDEPCDPDSEMDIDIECELVSSKVKKEIAEPQPNDLALDISSQKADEDNVKVEQNTVNDLAKETDLKC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0001 273 PRINTS Histone deacetylase signature 22 35 IPR003084 GO:0004407|GO:0016575
Aed9g0001 273 PRINTS Histone deacetylase signature 39 57 IPR003084 GO:0004407|GO:0016575
Aed9g0001 273 PIRSF HDAC_I_euk 1 270 IPR003084 GO:0004407|GO:0016575
Aed9g0001 273 MobiDBLite consensus disorder prediction 182 217 - -
Aed9g0001 273 Gene3D Histone deacetylase domain 1 192 IPR037138 -
Aed9g0001 273 PANTHER HISTONE DEACETYLASE 19 1 240 - -
Aed9g0001 273 PANTHER HISTONE DEACETYLASE 1 240 - -
Aed9g0001 273 MobiDBLite consensus disorder prediction 199 217 - -
Aed9g0001 273 MobiDBLite consensus disorder prediction 231 256 - -
Aed9g0001 273 Pfam Histone deacetylase domain 1 123 IPR023801 -
Aed9g0001 273 SUPERFAMILY Arginase/deacetylase 1 180 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0001 Aed-Chr9 524 10261 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0001 K06067 - gmx:100795375 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0001 9 524 10261 Aed9g0001 9 524 10261 ECH