Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1996 ATGGCAGATCAAACCCCGGGTTCAAGAACCGTTTCTGTTGAAGCTGCTGCTTCTTCACATGATCAAAGAAGGAAACTTCCAAACTTTCTGCTATCTGTGAAGCTTAAGTATGTGAAGCTTGGTTACCACTACTTGATCTCCAATGCTATGTACCTTTTGCTCATACCCCTTCTTGGGGTAGCTTCTGCTCATCTATCAACAATCTCATACCAAGATGTTGCTCAGCTTTGGGAAAATCTCAAGTTCAATCTTGTCTCAGTGACTCTATGTTCTAGTCTTATAGTGTTCCTTGTCACCTTTTACTTCATGAGCCGCCCAAGAGGTGTTTACTTGGTGGATTTTGCTTGTTACAAGCCAGATACAGATTGCACCTGCACAAGGGAGATTTTCATGGACAGGTCTGTGCAAACTGGTGTGTTCTCAGAGGAGAACTTGGCCTTTCAGAAGAAGATTATTGAGAGGTCTGGTTTGGGCCAAAAAACTTACTTGCCTCAAGCAATTTTGAGTGTCCCTCCAAACCCTTGTATGGCTGAAGCAAGGAAAGAAGCTGAGGAAGTTATGTTTGGAGCCATTGACCAGCTTCTGGCCAAAACTGGGGTCAAGGCTAAGGATATTGGGATTTTGGTGGTGAATTGCAGCTTGTTCAACCCCACACCATCTCTCTCTGCAATGATTGTGAACCACTACAAGCTCAGAGGGAATATCCAAAGCTATAATCTTGGTGGCATGGGTTGCAGTGCTGGCCTTATCTCTATAGACCTTGCCAAACAGCTCCTCCAGGTTCATCCAAATTCTTATGCCTTAGTGGTGAGCATGGAGAACATCACTCTCAACTGGTATTTTGGCAACAACAGATCAATGCTAGTCTCAAATTGTCTCTTCAGAATGGGTGGAGCTGCAGTTCTTCTCTCCAACAAGTCTTCTGATCGCAAAAGAGCTAAATACCAACTGATCCATACAGTGCGAACTCATAAGGGTGCAGATGACAAATCCTATGGCTGTGTGTTCCAAGAAGAGGATGAGAAGAAAACAATTGGTGTGTCACTCTCAAAGGACTTGATGGCTGTTGCTGGAGAAGCCCTCAAGACCAACATCACAACACTTGGGCCATTAGTCCTTCCCATGTCAGAGCAGCTATTGTTTTTTGCAACTTTGGTGGCTAGGAAAGTGTTCAAGATGAAAATAAAGCCATACATTCCAGACTTTAAGCTAGCTTTTGAACACTTTTGCATCCATGCTGGGGGAAGAGCAGTGTTGGATGAGTTGGAGAAGAATCTTGAGCTGAGTGATTGGCACATGGAGCCTTCAAGAATGACTCTAAACAGGTTTGGCAACACTTCTAGCAGCTCCTTGTGGTATGAATTGGCCTACACTGAAGCCAAAGGGAGGATCAGAAAGGGTGACAGGACTTGGCAGATTGCATTTGGTTCTGGATTCAAGTGCAACAGTGCTGTGTGGCGTGCTTTGAGGACCATTAATCCTGCGAAGGAGAAAAATCCTTGGATGGATGAGATTCATGAGTTCCCTGTTCATGTGCCTAAAGTTTCAACCATTGGTTCCTCCTAA 1566 0.4451 MADQTPGSRTVSVEAAASSHDQRRKLPNFLLSVKLKYVKLGYHYLISNAMYLLLIPLLGVASAHLSTISYQDVAQLWENLKFNLVSVTLCSSLIVFLVTFYFMSRPRGVYLVDFACYKPDTDCTCTREIFMDRSVQTGVFSEENLAFQKKIIERSGLGQKTYLPQAILSVPPNPCMAEARKEAEEVMFGAIDQLLAKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNIQSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAVLLSNKSSDRKRAKYQLIHTVRTHKGADDKSYGCVFQEEDEKKTIGVSLSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSDWHMEPSRMTLNRFGNTSSSSLWYELAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAKEKNPWMDEIHEFPVHVPKVSTIGSS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1996 521 CDD CHS_like 91 486 - -
Aed8g1996 521 SUPERFAMILY Thiolase-like 318 488 IPR016039 GO:0016746
Aed8g1996 521 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 407 487 IPR013747 -
Aed8g1996 521 Gene3D - 118 488 IPR016039 GO:0016746
Aed8g1996 521 PIRSF Very_long_ch_3-ktacl-CoA_syn 28 521 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed8g1996 521 SUPERFAMILY Thiolase-like 95 312 IPR016039 GO:0016746
Aed8g1996 521 PANTHER 3-KETOACYL-COA SYNTHASE 20 517 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed8g1996 521 Pfam FAE1/Type III polyketide synthase-like protein 101 390 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aed8g1996 521 PANTHER 3-KETOACYL-COA SYNTHASE 20 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1996 Aed-Chr8 24418086 24420840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1996 24 518 Miscellaneous Gene Families AT2G26640 78.182 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1996 K15397 - gmx:100782027 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1996 8 24418086 24420840 Aed8g1996 8 24418086 24420840 ECH