Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1984 TCATTTCAAACCCATTCTTCACGAAAAAAAAAACTCTCACTTTCATCATTCTCCCGAGAAAATCAACTCATTCTTCGTCTTCTCAGCAGCGACGACGGAAATTCCCAACACGAAGCAGCGATTCGCAGATCCCTTGTGTTGTTCAGATACAAGAGCCCCAAAATGTCCAAACCTCAAAATGATCCTCTTTTGCAATCGGAAACAACATGTGGAACACTTCTCTATGAACTTCAGATAATATGGGACGAAGTTGGGGAAAATGAGACTGACAGAGATAGAATGCTGTTTGAACTTGAACAAGAGTGCCTAGAAGTATACCGAAGGAAGGTAGATCTGGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATTGCCGAATGTGAGGCAGAACTTGCAGCCATTTGTTCATCAATGGGAGAGAGGCCAGTGCATATTCGACAGAGTAGTCGCTTAAAGCAAGTCCAGGAACACCTGTATACATTAAATTCTCTTTGTTTAGTGCTTGGTTTGGACTTTAAGCAGACAATTAACGTAATTCATCCCAGTTTAGTGGACTCAGAAGGACCCAAGAGTGTAAGTAATGATACCATTCAGCAATTAGCTGTTGCTATACAAGGACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACTACAATGTTGGAGCTCTGGAACTTGATGGATACCCCAATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAACATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCCTGTCTGTGGAATTCATCAATTTGGTTGAGGCGGAAGTAGCCAGGTTAGAAGAGTTAAAATCTAGCAAGATGAAAGAGCTTGTATTAAAGAAGAGAACAGAGCTGGAGGAGATTTGCCGAAAGACTCATTTGATTCCAGAAATAGATAATGCAGTGGAATACGCTGTTGATGCCATCGAATCTGGTAACTTTCTGCTTTCTAGCAAGTCGATTGCAATTATTTCCTATGCAAACTTAAAAGTCAGCATCTTCCTTTTTGATGCAGGATCTGTGGACCCTGCTTGTGTGCTTGAACAGATTGAACTTCAGGTTGCCCAACTCAAAGAGGAAGCTTTTAGCAGAAAAGAGATACTGGAAAAGGTTGAGAAATGGTTGTCAGCGTGTGATGAAGAGTCCTGGCTTGAGGAGTACAACAGGGATGATAATCGGTACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCATTGGTTGTCAAAATTCCAGCAATGGTGGATGCTCTGACTTCAAAAACTATTGCATGGGAGAAGGAGAAAGGCATTGAGTTCACATATGATGGTATTCGTCTACTTTCTATGCTTGAAGAATACAATATATTACGGCAAGAGAAAGAGCAAGAACGTCGCAGGCAGCGGGATCTGAAGAAACTCCATGGGCAAATGATAGCTGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAAAGTGTTAAAAAGGGACCTAGGATGTCAACCGGAGGTGCAGCTAGTAGAAGAGTATCGCTGGGAGGAGCAATGCTTCAAACTCCAAAACCTGATTCGAAATCTACTCACTCACGTGCTACGAGAAAGATTGACAAAGAGCATCTAAATTACCTGGATGAAGGTTTATCAGCAGCTAGAAGAGGGCTGGATATTGCTGGGGTTCCTGTAAAAAAGCACTCATTTGGTGCTGGGACTCAAATCATAGAATCTCCTCTGATGCGGCAACCATTTTCTCCCCTCTCTTCTAACAGTGTATCTTCAAAAGCTAATGTGGCAAATGTTACAGATGAACTGAACAAACAGAGTGAGAAGTTGCAGAGGACAGTGTCGCTTAACAATGTGCCATTTACTACTCCCTCCAAGACAGCTACTACTGTGGTAGATGAAGAGAATAGAACTCCAAAGGCAATGCCAATTCCTGTTCCAGCTACCCCTTCGACAATATCAGTTCCAATGAATATGGTCATGACTCCAGTTCCTTCGTCTATTATGAAGAATATAAGCTTGAATTCAACGCCCACATCAGTTCCTCATGGAAATGACTTGGTTCATGAGGTTGAATATTCCTTTGAGGAAAAAAGGCTCAGTTATTATATGTTAGCATAA 2163 0.423 SFQTHSSRKKKLSLSSFSRENQLILRLLSSDDGNSQHEAAIRRSLVLFRYKSPKMSKPQNDPLLQSETTCGTLLYELQIIWDEVGENETDRDRMLFELEQECLEVYRRKVDLANRSRAQLRQAIAECEAELAAICSSMGERPVHIRQSSRLKQVQEHLYTLNSLCLVLGLDFKQTINVIHPSLVDSEGPKSVSNDTIQQLAVAIQGLREVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEHEVTEPNTLSVEFINLVEAEVARLEELKSSKMKELVLKKRTELEEICRKTHLIPEIDNAVEYAVDAIESGNFLLSSKSIAIISYANLKVSIFLFDAGSVDPACVLEQIELQVAQLKEEAFSRKEILEKVEKWLSACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVVKIPAMVDALTSKTIAWEKEKGIEFTYDGIRLLSMLEEYNILRQEKEQERRRQRDLKKLHGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMLQTPKPDSKSTHSRATRKIDKEHLNYLDEGLSAARRGLDIAGVPVKKHSFGAGTQIIESPLMRQPFSPLSSNSVSSKANVANVTDELNKQSEKLQRTVSLNNVPFTTPSKTATTVVDEENRTPKAMPIPVPATPSTISVPMNMVMTPVPSSIMKNISLNSTPTSVPHGNDLVHEVEYSFEEKRLSYYMLA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1984 720 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 147 324 IPR007145 GO:0000226|GO:0008017
Aed8g1984 720 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 341 628 IPR007145 GO:0000226|GO:0008017
Aed8g1984 720 Pfam Microtubule associated protein (MAP65/ASE1 family) 72 146 - -
Aed8g1984 720 Pfam Microtubule associated protein (MAP65/ASE1 family) 147 506 - -
Aed8g1984 720 Coils Coil 103 130 - -
Aed8g1984 720 Gene3D - 364 498 - -
Aed8g1984 720 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 341 628 - -
Aed8g1984 720 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 61 148 - -
Aed8g1984 720 Coils Coil 267 287 - -
Aed8g1984 720 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 61 148 IPR007145 GO:0000226|GO:0008017
Aed8g1984 720 Coils Coil 457 484 - -
Aed8g1984 720 MobiDBLite consensus disorder prediction 491 549 - -
Aed8g1984 720 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 147 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1984 Aed-Chr8 24335163 24340344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1984 149 546 EF-hand Containing Proteins AT5G62250 56.750 1.24e-134 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1984 K16732 - gmx:100777734 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1984 8 24335163 24340344 Aed7g0476 7 3388656 3393517 ECH
Aed8g1984 8 24335163 24340344 Aed8g1984 8 24335163 24340344 ECH
Aed7g0476 7 3388656 3393517 Aed8g1984 8 24335163 24340344 PCT