Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1978 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTACCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAGCCAGATGTGGCTGAGTTCATATCAGCACTGGCTGCAGGAAACAATGCAAAAGTTATGGTTGCGGCATGCGGCGGCGCAGCGGACTCCAGCACACTAGCATTGGTTGCCGCTGCTAACCAAACCGGCGGGCAAGTAATTTGTATCGTCCCTGGGCACGAAGAGCTAAGAGTCTTGCGAGGAATGCAGACTTCTTATCATCACCAAGTTCAATTCATGGTTGGAGAAGCTCGAGAAGTGCTTTTAGAGCGCTATGATCTGCAGGCAGCAGATTTTGTGCTCATTGACTGCAACCTTGAGAACCATGAAGAGATTCTTAAAGCAGTTGAAGAGGGTAGGAAGAAGCAAAATGGAACAGTGGTTGTTGTGGGGTACAATGCATTTAGCTGCAGAAAGTCTTGCTTGTCGTGTGGGTCGAAAACGCAGCTTCTGCCTATAGGAGGTGGTTTGCTTGTGACTAGATTTGGATCATCATATGGCACCAGATTAATGGGAAAGGTCAACAAAAGCCGTTGGGTTGTCAAGGTAGATAAATGCACAGGCGAGGAACATGTGTTTAGGGTCAGATCTCCTCAAAGGAAAGTCATCCAAGCTTAA 669 0.4738 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAKVMVAACGGAADSSTLALVAAANQTGGQVICIVPGHEELRVLRGMQTSYHHQVQFMVGEAREVLLERYDLQAADFVLIDCNLENHEEILKAVEEGRKKQNGTVVVVGYNAFSCRKSCLSCGSKTQLLPIGGGLLVTRFGSSYGTRLMGKVNKSRWVVKVDKCTGEEHVFRVRSPQRKVIQA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1978 222 PANTHER DUF1442 FAMILY PROTEIN 1 222 IPR009902 -
Aed8g1978 222 Gene3D Vaccinia Virus protein VP39 5 180 IPR029063 -
Aed8g1978 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 150 IPR029063 -
Aed8g1978 222 Pfam Protein of unknown function (DUF1442) 3 211 IPR009902 -
Aed8g1978 222 PANTHER BNAA09G06020D PROTEIN 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1978 Aed-Chr8 24288542 24289442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1978 - - gmx:100775961 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1978 8 24288542 24289442 Aed8g1978 8 24288542 24289442 ECH
Aed7g0468 7 3338470 3339450 Aed8g1978 8 24288542 24289442 PCT