Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1607 ATGGGGTGCAATTATTTGTGGTTGGTCTTTTGCTTGTGGGCTTTAACATGCTCACTTCTTCCTTCATTCTCCTTTGGACTTGTGAGAATTGGTTTGAAGAAGCGAGATCTAGATCTTGATAGTATTAGAGCAGCTAGAATGGTTAGAGAAAAGCTAAGATTAGGCCGACCTGTGTTGGGCGCGAATGATCAGTATCTTAGCAAACCAACCGATGAGGGCATAATTGCCTGCTATACCCATCATTGGTACAAGTCAAAGAAATCCAAAACATATAACAAAAATGGAACATCATGTAAAATAAGCTATGGATCTGGATCAATATCTGGCTTTTTCAGTAAAGATAATGTTAAAGTTGGTGATCTTGTTGTTAAGAATCAGGATTTCATCGAGGCTACCCGAGAAGGAAGTCTTTCCTTTGTGCTAGCAAAGTTTGATGGAATACTTGGGCTTGGGTTTCAGGAGATCTCAGTTGCAAATGCTGTGCCAGTATGGTACAATTTGGTGCAGCAAAATCTTGTAAGCGAGCAAGTGTTCTCCTTTTGGCTCAATAGTGATCCAAAAGAGAAAAATGGTGGTGAACTAGTTTTTGGAGGTGTTGATCCTAAACACTTCAAAGGAGAACATATTTATGTTCCAGTTACTAAAAAGGGTTACTGGCAGATTGAAATGGGTGACTTTTTCATTGGAGGTCTCTCAACAGGTGTTTGTGCGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTCGCTGGTCCAACTACTGTTGTAACTGAAATCAATCATGCTATTGGAGCTGAAGGAGTTCTAAGTGTAGAGTGTAAGGAAGTTGTTTCTGAATATGGAGAATTGTTATGGGATCTCTTGGTATCTGGGGTGCGACCTGATGATGTATGCTCACAGGTTGGTTTATGTTTCGCCAAAAGGGCTAAATCAGAGAGCAATAGAATTGAGATGGTTACTGAAAAGGAACAGTCAGAGTTGTTAGGTAAAGATACTGCTTTGTGCACTTCCTGTCAGATGCTTGTGGTTTGGATTCAGAATCAACTAAAACAAAAGAAGACCAAGGAGATAGTATTCGGCTATGTAAATCAGTTGTGTGAGAGCTTGCCAAGTCCTAATGGAGAGTCAGTAGTAGACTGTAATAGCATTTCTGGATTGCCAAACATCACGTTTACTTATATTCTGAAAACTGGAGAAGGCATTGCAGAAGTTTGCCTTAGTGGGTTTATTGCTTTTGACATCCCTCCTCCAAGGGGTCCTCTCTGGATTATTGGCGATGTTTTCATGAGGGTATATCACACCGTCTTTGACTATGGAAATCTCCAAGTTGGTTTTGCCAAAGCTGCCTAA 1356 0.4086 MGCNYLWLVFCLWALTCSLLPSFSFGLVRIGLKKRDLDLDSIRAARMVREKLRLGRPVLGANDQYLSKPTDEGIIACYTHHWYKSKKSKTYNKNGTSCKISYGSGSISGFFSKDNVKVGDLVVKNQDFIEATREGSLSFVLAKFDGILGLGFQEISVANAVPVWYNLVQQNLVSEQVFSFWLNSDPKEKNGGELVFGGVDPKHFKGEHIYVPVTKKGYWQIEMGDFFIGGLSTGVCAGGCAAIVDSGTSLLAGPTTVVTEINHAIGAEGVLSVECKEVVSEYGELLWDLLVSGVRPDDVCSQVGLCFAKRAKSESNRIEMVTEKEQSELLGKDTALCTSCQMLVVWIQNQLKQKKTKEIVFGYVNQLCESLPSPNGESVVDCNSISGLPNITFTYILKTGEGIAEVCLSGFIAFDIPPPRGPLWIIGDVFMRVYHTVFDYGNLQVGFAKAA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1607 451 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 242 253 IPR001969 GO:0004190|GO:0006508
Aed8g1607 451 SUPERFAMILY Saposin 271 372 IPR011001 -
Aed8g1607 451 SUPERFAMILY Acid proteases 7 450 IPR021109 -
Aed8g1607 451 PRINTS Pepsin (A1) aspartic protease family signature 424 439 IPR001461 GO:0004190|GO:0006508
Aed8g1607 451 PRINTS Pepsin (A1) aspartic protease family signature 192 205 IPR001461 GO:0004190|GO:0006508
Aed8g1607 451 PRINTS Pepsin (A1) aspartic protease family signature 242 253 IPR001461 GO:0004190|GO:0006508
Aed8g1607 451 ProSiteProfiles Saposin B type domain profile. 333 374 IPR008139 -
Aed8g1607 451 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 75 451 - -
Aed8g1607 451 Pfam Saposin-like type B, region 1 336 372 IPR007856 GO:0006629
Aed8g1607 451 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 5 75 - -
Aed8g1607 451 Pfam Eukaryotic aspartyl protease 75 450 IPR033121 -
Aed8g1607 451 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 75 451 IPR001461 GO:0004190|GO:0006508
Aed8g1607 451 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 5 75 IPR001461 GO:0004190|GO:0006508
Aed8g1607 451 SMART sapb_4 234 306 IPR008139 -
Aed8g1607 451 Gene3D Acid Proteases 62 198 IPR021109 -
Aed8g1607 451 Gene3D - 270 372 - -
Aed8g1607 451 ProSiteProfiles Saposin B type domain profile. 270 310 IPR008139 -
Aed8g1607 451 Gene3D Acid Proteases 199 451 IPR021109 -
Aed8g1607 451 Pfam Saposin-like type B, region 2 274 306 IPR008138 -
Aed8g1607 451 ProSiteProfiles Peptidase family A1 domain profile. 1 448 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1607 Aed-Chr8 21202275 21205970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1607 K08245 - gmx:547993 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1607 8 21202275 21205970 Aed8g1607 8 21202275 21205970 ECH
Aed2g2370 2 26906437 26911532 Aed8g1607 8 21202275 21205970 PCT