Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1527 ATGGTTCTTCTTCTTCGGTCTTCTCCGTTGGTGGCATTCGCGGCCATCATCGTCCTCTGCGTGGTGGGATTCTATTCTCTGCATTTCCCTCTCCGTCACTATTCAAAAACCGCAACTGAAACTGATGCCACCTCGCGCTTCCACCACGTGTTCCTCTCGTCTTCCTCGAACGCCACCGTCGCGAACTACCTCCGCACCCTCACCGCGCACCCTCACCTCGCCGGAACAAAGCCCGCCGCGTCAACCGCGCGCTACGTGCTGAACCACTTTGCCAACCTCGGACTCGAAACCAGAACGGCGGAGCACCCCGCGCTGCTATCCTACCCGGTGCGGTCCTCTCTTGCGGCACATTTTAGCAACGGCACGAGTCACAAGTTTCGGTTAGCGGAACCAGGTCTGGAGGAGGCGGATGAGGTGGTGAGGCCTTACCACGCTTACTCGCCGTCAGGAGCAGCGGAGGCAGCGGCGGTGTACGTGAACTACGGACGGGAGGAGGATTATCGGTTACTTTCTGCGGCAGGGGTGGATGTGTCCGGATGCGTGGCAGTGGCGAGGGGAGGAAGACTACCGCGCGGGGCGGTGGTGGAGGTGGCGGAGAGGCGTGGGGCGGTGGCAGCGGTGGTGTTCGGGGAGTGGGACACGTGGCAGGGGGCACGTGATGCGAGGGGGATAGGGGACCCGCTGAGTCCAGGGTGGGGTGGGGTCGAGGGTGGGGAGAGTTTGGGTTTGGACGATAGTAAGGTTTTTGAAAAGTTTCCTAAAATTCTATCCATGCCCTTGTCCGCTGAGGCTGCTGAGAGGATCTTGGAGTCTCTTGGTGGTGCTCCTCTGCCCTTGGATTGGAAGGGTACCGTCAACCTCAAGGTTAGGAATGTTGGTCCTGGCCCCACCATCCTCAACTTCACTTATCAGGGTGAATTGAAGGTGGCCACCATTGAAAACGTTTTTGCCATTATCAAGGGACGTGAAGAATGTGATCGCCATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGACCCCAACAGTGGGACAGCTGCCCTTCTTGACATTGCTCGCAGATTTTCTATTCTATCGCGTTCCGGGTGGACTCCACGGAGGACCATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAGTGATAGGATCCACTGAGTGGGTTGAACAAAACCTTGTTAATCTTCGTTCCAAAGCTGTAGCATACCTTAATGTAGACTGTGCTGTTCAAGGTCCTGGTTTGTTTGCTGGCTCAACTCCTCAGCTTGACGATCTCCTTCTCGAGGTCATAAAACAGATCAAGGATCCTGACTCTGATGAGGGTACAACGATATATGAGAATTGGGAAGCTGCTGGTGGAAACCCTAATATTCAGAGGCTCGGCAGTGTAAATTCTGATTTTGCTCCATTTGTGCAACATGCAGGGGTTCCATCTATTGATGTATATTATGGAAAAGATTATCCTGTCTATCACACTGCTTTCGATTCCTATAACTGGATGATAAAGTCTGGAGATCCATTCTTTCAGCGCCACATAGCTGTTGCTGGAGTTTGGGGGCTTTTAGCCCTTCGCCTTGCTGATGATTCCATTATACCTTTCAATTATCTTCCTTATGCGGATCAGTTACAGGAAACTTCAAATCGTTCTATAGATATGAAAATGCGAGCATTGAATGATAGACTGATGCTTGCGGAAAAAGGCTTCTTGGACACTGATGGGCTTCCAGGAAGGAAATGGTTCAAGCATCTTGTTTATGGGCCTCCTGACGACCATGAAAGCAAGATTGATTTCTTCCCCGGAATCGCGGACTCGATGTCTGAGATGGTAGAAATGAGTGAAAAAGAAAGGCTGGCTGCAATTCAGCATGAGATCTGGAGGGTTGCCAGGGCAATTCAAAGAGCTGCTTCAGCACTAAGAGGGGATTTGGCTTAA 1944 0.5206 MVLLLRSSPLVAFAAIIVLCVVGFYSLHFPLRHYSKTATETDATSRFHHVFLSSSSNATVANYLRTLTAHPHLAGTKPAASTARYVLNHFANLGLETRTAEHPALLSYPVRSSLAAHFSNGTSHKFRLAEPGLEEADEVVRPYHAYSPSGAAEAAAVYVNYGREEDYRLLSAAGVDVSGCVAVARGGRLPRGAVVEVAERRGAVAAVVFGEWDTWQGARDARGIGDPLSPGWGGVEGGESLGLDDSKVFEKFPKILSMPLSAEAAERILESLGGAPLPLDWKGTVNLKVRNVGPGPTILNFTYQGELKVATIENVFAIIKGREECDRHVLLGNHRDAWTYGAVDPNSGTAALLDIARRFSILSRSGWTPRRTIILCSWDAEEFGVIGSTEWVEQNLVNLRSKAVAYLNVDCAVQGPGLFAGSTPQLDDLLLEVIKQIKDPDSDEGTTIYENWEAAGGNPNIQRLGSVNSDFAPFVQHAGVPSIDVYYGKDYPVYHTAFDSYNWMIKSGDPFFQRHIAVAGVWGLLALRLADDSIIPFNYLPYADQLQETSNRSIDMKMRALNDRLMLAEKGFLDTDGLPGRKWFKHLVYGPPDDHESKIDFFPGIADSMSEMVEMSEKERLAAIQHEIWRVARAIQRAASALRGDLA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1527 647 Pfam Transferrin receptor-like dimerisation domain 548 642 IPR007365 -
Aed8g1527 647 Pfam Peptidase family M28 314 502 IPR007484 -
Aed8g1527 647 PANTHER F10A2.10 PROTEIN-RELATED 32 550 - -
Aed8g1527 647 PANTHER F10A2.10 PROTEIN-RELATED 555 646 - -
Aed8g1527 647 Gene3D - 542 647 IPR036757 -
Aed8g1527 647 Gene3D - 112 305 - -
Aed8g1527 647 SUPERFAMILY PA domain 105 316 IPR046450 -
Aed8g1527 647 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 32 550 IPR039373 -
Aed8g1527 647 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 555 646 IPR039373 -
Aed8g1527 647 SUPERFAMILY Zn-dependent exopeptidases 56 533 - -
Aed8g1527 647 CDD M28_PSMA_like 310 537 - -
Aed8g1527 647 Gene3D Zn peptidases 59 536 - -
Aed8g1527 647 SUPERFAMILY Transferrin receptor-like dimerisation domain 536 644 IPR036757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1527 Aed-Chr8 20533369 20540169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1527 K01301 - gmx:100817485 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1527 8 20533369 20540169 Aed8g1527 8 20533369 20540169 ECH
Aed2g2134 2 25406739 25410721 Aed8g1527 8 20533369 20540169 PCT