Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1495 ATGCTGAGCGTGGTGCGCGTGCACCTGCCGTCGGAAATCCCCATTGTAGGCTGCGAACTCACGCCGTACGTTCTCCTTCGCCGCCCCGACAAGAGCGTCTCCACCGACGATGTTCCCGAAACCGCGCCGTTAGACGGAAGTTTCTTGCGCTATAAATGGTTCAAATTCTATATTTTAGCACCCCCTCCCTTTTTCATGTTTTGGTTTTGGGTTAGTTGGTATCGTGTACAGAGTGATAAAAAAGTTGCTGTCTGTAGCATACATCCATCAGAGCAAGCCACCCTGCAATGCCTAGGCTGTGTTAAGGCCAAAATACCTGTTTCCAAGAGTTACCATTGCACCACGAAGTGTTTTTCGGATGCATGGCAGCATCATCGTGTCTTACATGATCGTGCTGCAAGTGCTCTTAATGAAAATGGAAATGAGGAGGAGGAGGTATTTGGGCGCTTTAATAGTACTGGGTCAAGTGCTAGCTTATCTGCCTCTGCATCAAGTGCTAACTTGACAAATGGGTCTGCAACACCTTTGTATCCAGCAGCCATCACACAAAGAAGTGGTGAAACTTGGTTTGAAGTTGGACGAGCTAAGACTTACACCCCTACTGCTGATGACATTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGACGCAGAGACAAAACTGCCTGTGGGGCATGTTAACACTATACTAACTTCACGTGTCATTCCAGCTCCCTCGCCTATTCCGCGCCGACCGATACCTGTTGATGGGATGGGGCATGTAGATGTGGATGGGAGAATGACATCTTCAGGAACTTTTACTGTTCTATCATACAATATATTGTCTGAAGCATATGCCTCAAATGATCTATACAATTACTGCCCTTCATGGGCACTTTCTTGGCCATATCGCAGGCAAAATTTGTTACGAGAAATGGTTGGTTACCGTGCAGACATTATTTGTCTTCAGGAGGTTCAAAATGATCATTATGATGAATTTTTTTCTCCTGAACTGGACAAACATGGATATTATGGTCTTTACAAGAGGAAAACAAATGAGGTGTACAGTGGCAACACAAATACAATTGATGGGTGTGCAACATTTTTCCGTAGAGACAGATTTTCTCATGTTAAGAAATACGAGGTTGAATTTAACAAGGCTGCGCAGTCTTTGACAGAGGCTACAATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGACTGGTTAAGGATAATGTTGCACTAATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCCATTTGATAATCCTGGGAAAAGGCAGCTACTTTGTGTGGCGAATACACATGTAAATGTTCCCCAAGATTTAAAGGATGTGAAACTCTGGCAGGTACATACTCTCTTAAAAGGGTTGGAGAAAATAGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCGGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTAGATCCTTCACATCCTGATTTAGCAGTTGACCCGCTTAACATTTTACGTCCTCACAGCAAGTTGGTTCATCAGTTACCACTGGTCAGTGCATACTCATCTTTTGCAAGAACAGTTGGCCTTGGATATGAGCAGCACAAAAGGAGACTAGATGGTGGAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTATTGGAGTTACTGGATGAGGAGAGTTTGAGGAAGGACACTGCACTTCCTTCTCCTGAATGGTCGTCAGATCACATAGCTCTCTTAGCTGAATTTCGCTGCTGCAAGAATAAATCTAGGCGTTGA 1854 0.4364 MLSVVRVHLPSEIPIVGCELTPYVLLRRPDKSVSTDDVPETAPLDGSFLRYKWFKFYILAPPPFFMFWFWVSWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTTKCFSDAWQHHRVLHDRAASALNENGNEEEEVFGRFNSTGSSASLSASASSANLTNGSATPLYPAAITQRSGETWFEVGRAKTYTPTADDIGHVLKFECVVVDAETKLPVGHVNTILTSRVIPAPSPIPRRPIPVDGMGHVDVDGRMTSSGTFTVLSYNILSEAYASNDLYNYCPSWALSWPYRRQNLLREMVGYRADIICLQEVQNDHYDEFFSPELDKHGYYGLYKRKTNEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPFDNPGKRQLLCVANTHVNVPQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTVGLGYEQHKRRLDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNKSRR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1495 617 Pfam Endonuclease/Exonuclease/phosphatase family 270 601 IPR005135 GO:0003824
Aed8g1495 617 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 59 614 - -
Aed8g1495 617 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 59 614 - -
Aed8g1495 617 SUPERFAMILY DNase I-like 262 611 IPR036691 -
Aed8g1495 617 CDD Deadenylase_CCR4 269 610 - -
Aed8g1495 617 Gene3D Endonuclease/exonuclease/phosphatase 242 616 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1495 Aed-Chr8 20124633 20132444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1495 295 497 EF-hand Containing Proteins AT5G54130 25.701 3.04e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1495 K12603 - gmx:100819402 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1495 8 20124633 20132444 Aed8g1495 8 20124633 20132444 ECH
Aed2g2148 2 25495249 25502267 Aed8g1495 8 20124633 20132444 PCT