Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1467 ATGGATTCTTCTTCTGATCAATCTCCCTCATCATCATTTTATTCTCCTGGAGATGTTCAAAACGTTAAGTTCTGTCAGTGTTGTGGTGGTCCAGCGAAGCATGAAATACCTGAGGGAGAAGAAAGGTTGAGAGCCATTTGTACAAGCTGTGGGAAGATTACCTATCAGAATCCAAAAATGTCGGTTGCCTCATTGAACAAGATAACAAGGACACTTCCTGCTGGTTATTTAGAAATTGGAGAGTCGGCTATGGAAGGTGCTATCCGGGAAACATGGGAGGAAGCCAACGCTGATGTGGAAGTGATTTCTCCCTTTGCTCAATTGGATATTCCTTTAATTGGCCAAACTTATATAATCTTCTTAGCAAGGTTGAAGAATCCCCACTTTTCACCTGGTCCAGAATCATCCGAATGCCAGCTTTTCTCATTCAATGAAATACCTTTCAGTTCTCTATCTTTTTCATCAATGGTGGATATGAAGGCAGGAGGAAAGCCTAAATTCCATTATGGTACCATTAACAAAAGGTATTTCCATATTATCAAATATCTATCCATTTATCTGTAA 564 0.3972 MDSSSDQSPSSSFYSPGDVQNVKFCQCCGGPAKHEIPEGEERLRAICTSCGKITYQNPKMSVASLNKITRTLPAGYLEIGESAMEGAIRETWEEANADVEVISPFAQLDIPLIGQTYIIFLARLKNPHFSPGPESSECQLFSFNEIPFSSLSFSSMVDMKAGGKPKFHYGTINKRYFHIIKYLSIYL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1467 187 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 63 179 - -
Aed8g1467 187 Gene3D - 20 56 - -
Aed8g1467 187 ProSitePatterns Nudix box signature. 75 96 IPR020084 GO:0016787
Aed8g1467 187 PANTHER NUDIX HYDROLASE 23 11 175 - -
Aed8g1467 187 Pfam Nudix N-terminal 23 56 IPR029401 -
Aed8g1467 187 Pfam NUDIX domain 71 146 IPR000086 -
Aed8g1467 187 ProSiteProfiles Nudix hydrolase domain profile. 1 164 IPR000086 -
Aed8g1467 187 PANTHER BNAA03G19740D PROTEIN 11 175 - -
Aed8g1467 187 SUPERFAMILY Nudix 23 148 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1467 Aed-Chr8 19631966 19634929 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1467 K18453 - gmx:100777180 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1467 8 19631966 19634929 Aed8g1467 8 19631966 19634929 ECH
Aed4g0368 4 2675421 2678466 Aed8g1467 8 19631966 19634929 PCT