Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1376 ATGTTGAGTTATCAAACACCTTCCACAAGCCATGGCACACAGCAACACCAACACACTGAAAGTTCAGAAAACGAGCAACAAATCAGAGAAATTCACGCCATAACCCCACCAAGAAGAGAACCAAACTTCGAAACACACACACACTCATCTTCTGCGTCCAGCGAGAACTTCAGCATCAGCAGAGAATTCAGCGCCCTTGTTCTCGCAGGCTCCAGTGTCGACCATACCATCACCACCACCACCGCCACCCCAACTCAAATGAGCTTCAACACGGTGCATGGCGATGAAATAGGAAGTGCAAATAGTAACATCAATAACTTGCGGAGAATTAGGGAGGATGATGAGTTGCTGATGATGGAGGAGGAGACCAACCCTTTGGCGATTGTGGCGGAGACCAACCCTTTGGAGGCAGTTTCGTCGCCGCCGCCGAGGCGAGGAGGGACTTCTTCTTTGGCTGGTGGTGGTGTGAATGAGGCGACGGTGCAGAGAGTGAGGAAGGAGGAGGTCGAGGCAAAGATAGCGGCATGGCAGAACGCCAAGGTTGCCAAGATCAACAACAGGTTCAAGAGGGAAGATGCTGTCATAAATGGATGGGAGAATGAGCAGGTTCAGAAAGCTTCTTCAACTATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAGAGCAATGGAGAAAATGCAAAATGAGGTAGCAAAAGCTCATAGAAAAGCTGAGGAGAGGAGGGCTTCAGCTGAGGCTAAAAGGGGAACTAAAGTAGCCAGGGTTCTTGAGATTGCCAATCTCATGAGAGCAGTTGGAAGAGCACCTACCAAAAGATCTTTCTTCTGA 834 0.4916 MLSYQTPSTSHGTQQHQHTESSENEQQIREIHAITPPRREPNFETHTHSSSASSENFSISREFSALVLAGSSVDHTITTTTATPTQMSFNTVHGDEIGSANSNINNLRRIREDDELLMMEEETNPLAIVAETNPLEAVSSPPPRRGGTSSLAGGGVNEATVQRVRKEEVEAKIAAWQNAKVAKINNRFKREDAVINGWENEQVQKASSTMKKVERKLEEKRARAMEKMQNEVAKAHRKAEERRASAEAKRGTKVARVLEIANLMRAVGRAPTKRSFF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1376 277 Pfam Remorin, C-terminal region 168 273 IPR005516 -
Aed8g1376 277 MobiDBLite consensus disorder prediction 228 251 - -
Aed8g1376 277 PANTHER OS02G0116800 PROTEIN 16 276 - -
Aed8g1376 277 MobiDBLite consensus disorder prediction 1 21 - -
Aed8g1376 277 Coils Coil 203 249 - -
Aed8g1376 277 MobiDBLite consensus disorder prediction 22 45 - -
Aed8g1376 277 PANTHER CARBOXY-TERMINAL REGION REMORIN 16 276 - -
Aed8g1376 277 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1376 Aed-Chr8 17929437 17932687 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1376 - - gmx:100784687 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1376 8 17929437 17932687 Aed8g1376 8 17929437 17932687 ECH
Aed4g0438 4 3148656 3151452 Aed8g1376 8 17929437 17932687 PCT