Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1362 ATGGCTTCTTTAGTGTCTTCTCCATTTACCTTACCCAATTCCAAGGTTGATCAACTTTCTTCTCTTTCCCAAAGACACCTTTTTCTTCATTCTTTCCTTCCCAAGAAGGCCAATTTCTATGGAAGGAGCTCAAATGCTTCCATAAGGGTGAAATGTGCTGCAATTGGCAATGGTCTCTTCACTCAAACCACCCCAGAAGTTCGAAGAATTGTTCCTGAGAACAACAACCAGAACCTTCCAACGGTTAAAATCGTGTACGTTGTGCTTGAGGCTCAGTACCAATCATCTCTCTCTGCTGCAGTTAGAGCTCTCAACAGCAGCAACAAAGATGCATCCTTTGAGGTTGTAGGGTACTTGGTCGAGGAGCTTCGCGACGAGAACACTTACAAGACCTTCTGCAAGGACTTGGAAGATGCCAATTTTTTCATAGGGTCACTGATTTTCGTGGAGGAGCTTGCCCTCAAGGTTAAGGCTGCAGTGGAGAAAGAAAGGGAGAGGCTTGATGCAGTTCTGGTGTTCCCATCAATGCCTGAGGTAATGAGGCTGAACAAGTTGGGATCTTTCAGCATGTCACAGCTTGGACAATCCAAAAGCCCTTTTTTTCAGCTTTTCAAGAAAAAAAAGCAGTCTTCTGCTGGTTTTGCTGATAGCATGTTGAAGCTGGTGAGGACTTTGCCAAAGGTGTTGAAGTATTTGCCAAGTGACAAGGCTCAGGATGCAAGGCTCTACATTCTGAGTCTGCAGTTTTGGCTTGGTGGATCACCTGATAACTTGCAGAACTTCCTCAAGATGATTTCGGGGTCGTATGTTCCGGCTTTGAAAGGAACAAAGATGGAGTATTCGGAGCCGGTTTTGTACTTGGACAGTGGAATTTGGCACCCTTTGGCTCCTTGTATGTATGATGATGTGAAGGAGTATTTGAACTGGTATGGAACCAGAAGGGATGCCAATGAGATGCTGAAGAGTCCGAGCGCACCGGTGATTGGTCTGATTCTGCAGAGGAGCCACATTGTGACTGGTGATGATGGCCACTATGTGGCTGTGATCATGGAGCTTGAGGCCAGAGGTGCTAAGGTTGTTCCGATTTTTGCCGGTGGACTCGACTTCTCAGGGCCGGTGGAGAGGTACTTGATTGATCCAATCACTAAGAGGACGTTTGTGAACTCTGTGGTGTCACTCACTGGCTTTGCACTTGTTGGAGGGCCTGCAAGGCAGGACCATCCAAGGGCTATTGAGGCTTTGATGAAGCTGGATGTTCCTTACATTGTTGCATTGCCATTGGTGTTCCAGACAACAGAAGAGTGGCTGAATAGTACTTTGGGTTTGCATCCAATTCAGGAGGAGAAGAAACTAGCAATCACTGTCTTCAGTTTCCCACCAGACAAAGGCAATGTAGGAACCGCAGCCTACCTAAACGTCTTCTCCTCCATTTTCTCTGTTCTAAAAGATCTTCAAATAGATGGTTACAATGTTGAGGGGCTTCCAGAAACATCAGAAGCTTTGATTGAAGAAGTAATACATGACAAAGAAGCACAATTCAGCAGCCCGAACCTGAACGTTGCTTACAAAATGAGTGTCCGCGAATACCAAACTCTAACTTCCTATGCCACAGCCTTAGAAGAAAACTGGGGAAAACCACCTGGGAATCTGAATTCAGATGGAGAGAATCTATTGGTATATGGAAAACAATATGGCAATGTATTCATAGGTGTTCAACCAACATTCGGCTACGAAGGCGATCCTATGCGGTTGCTTTTCTCCAAATCAGCAAGTCCTCATCATGGATTTGCTGCATACTACTCTTTTGTTGAGAAAATTTTCCAAGCTGATGCTGTCCTTCATTTTGGAACACATGGTTCCCTTGAATTCATGCCTGGAAAGCAGGTGGGGATGAGTGATGCATGTTATCCAGACAGCCTGATTGGTAACATTCCCAATGTCTATTACTATGCAGCAAACAACCCTTCTGAGGCTACCATCGCGAAACGTAGGAGCTATGCAAACACCATTAGCTATCTGACTCCTCCAGCTGAAAATGCAGGACTATACAAAGGTCTTAAGCAGCTAAGTGAGCTCATCTCCTCATACCAGTCCCTCAAGGACACCGGACGCAGGCCACAAATCGTGAGCTCGATTATCAGCACAGCTAAACAATGCAATCTTGACAAGGATGTGGAACTTCCAGAAGAGGGTGAAGAGCTCGCGGCTAAAGATTGCGACCTTGTGGTTGGAAAGGTGTATGCCAAGATCATGGAGATTGAGTCGCGCCTGTTGCCTTGTGGCCTCCATGTCATTGGCGAGCCACCCTCGGCCTTGGAAGCAGTTGCAACACTGGTGAACATAGCTGCACTTGATCGTCCTGAGGATGATATTTCGTCTCTCCCTTCTATACTAGCTGAGACTGTTGGAAGAAGCATTGAGGAAGTCTATAGAGGGAGTGACAAAGGAATACTAAAGGATGTAGAGCTTCTTCGCCAGATAACCGAAGCTTCGCGTGGAGCAATCACTTCCTTTGTCAAGCGGACTACTAATGACAAGGATAAGGTTGTTGATGTAGGTAACAAACTCACCTCAATCCTTGGATTTGGCATCAATGAACCATGGGTTGAGTACTTGTCGAACACCAAATTTTACCGGGCTGATAGGGAGAAACTCAGAACCTTGTTTGAGTTCTTGGGGGAGTGTTTGCAGTTGGTTGTAGCTGATAATGAATTGGGAAGTTTGAAACAAGCCTTGGAGGGAAAGTATGTGGAGCCAGGACCTGGTGGTGATCCAATTAGAAATCCTAAAGTTTTGCCAACAGGGAAGAATATTCATGCATTGGATCCACAAGCTATTCCTACTACAGCAGCAATGCAGAGTGCCAAAGTAGTGGTGGATAGATTGATTGAGAGGCAAAAAGCTGAAAATGGAGGAAAGTATCCTGAGACTATTGCACTTGTGTTGTGGGGAACAGATAACATTAAGACATATGGTGAGTCCCTGGCTCAGGTCTTGTGGATGGTTGGTGTCAATCCAGTAGCTGATACCTTTGGAAGGGTCAACCAGGTCGAACCTGTAAGTCTTGAAGAGCTTGGAAGGCCAAGGATTGATGTTGTTGTTAATTGTTCTGGAGTTTTCAGGGACCTTTTCATCAATCAGATGAATCTTCTGGATAGAGCAGTGAAGATGGTTGCTGAATTGGATGAACCAGCAGAGCAAAACTATGTGAGGAAGCATGCACTAGAACAAGCTCAAGCCCTTGGGATTGACATTAGAGAAGCAGCAACAAGGGTCTTCTCCAATGCCTCAGGGTCCTACTCCTCAAACATAAACTTGGCAGTGGAGAATTCTTCATGGAATGATGAGAAGCAGCTCCAGGACATGTACCTTAGCCGAAAGTCTTTCGCTTTTGACAGCGATGCGCCCGGTGCAGGCATGACTGAAAAGAGAAAGGTCTTTGAGATGGCTCTGAGCACAGCAGATGCCACATTCCAAAACCTTGATTCATCAGAAATCTCCCTCACTGATGTGAGTCATTACTTTGACTCAGATCCAACAAACCTTGTTCAAAATCTAAGGAAAGATGGGAAGAAGCCAAGTGCATACATTGCTGACACAACCACTGCTAATGCTCAGGTGCGTACCCTTTCTGAGACGGTTCGACTTGATGCAAGAACCAAGCTATTGAACCCCAAATGGTATGAAGGCATGCTGTCTAGTGGATACGAGGGCGTTCGCGAAATTGAGAAGAGGCTAACCAACACAGTTGGGTGGAGTGCAACTTCAGGCCAAGTTGACAACTGGGTGTATGAAGAAGCCAACACAACATTCATTCAAGATGAGGAAATGCTGAAGAAGCTCATGAGCACAAATCCAAACTCCTTTAGGAAGCTGGTGCAGACATTTTTGGAAGCCAATGGACGTGGTTACTGGGAGACTTCAGAGGAAAACATTGATAAGCTCAGGCAGTTGTACTCAGAAGTGGAAGACAAAATTGAAGGCATTGATCGCTGA 3996 0.4565 MASLVSSPFTLPNSKVDQLSSLSQRHLFLHSFLPKKANFYGRSSNASIRVKCAAIGNGLFTQTTPEVRRIVPENNNQNLPTVKIVYVVLEAQYQSSLSAAVRALNSSNKDASFEVVGYLVEELRDENTYKTFCKDLEDANFFIGSLIFVEELALKVKAAVEKERERLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQSSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALKGTKMEYSEPVLYLDSGIWHPLAPCMYDDVKEYLNWYGTRRDANEMLKSPSAPVIGLILQRSHIVTGDDGHYVAVIMELEARGAKVVPIFAGGLDFSGPVERYLIDPITKRTFVNSVVSLTGFALVGGPARQDHPRAIEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQEEKKLAITVFSFPPDKGNVGTAAYLNVFSSIFSVLKDLQIDGYNVEGLPETSEALIEEVIHDKEAQFSSPNLNVAYKMSVREYQTLTSYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFQADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRRPQIVSSIISTAKQCNLDKDVELPEEGEELAAKDCDLVVGKVYAKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDDISSLPSILAETVGRSIEEVYRGSDKGILKDVELLRQITEASRGAITSFVKRTTNDKDKVVDVGNKLTSILGFGINEPWVEYLSNTKFYRADREKLRTLFEFLGECLQLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKAENGGKYPETIALVLWGTDNIKTYGESLAQVLWMVGVNPVADTFGRVNQVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEQNYVRKHALEQAQALGIDIREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDSDAPGAGMTEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEEMLKKLMSTNPNSFRKLVQTFLEANGRGYWETSEENIDKLRQLYSEVEDKIEGIDR 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1362 1331 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 446 1330 - -
Aed8g1362 1331 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 85 446 - -
Aed8g1362 1331 Coils Coil 1305 1331 - -
Aed8g1362 1331 Pfam CobN/Magnesium Chelatase 447 1311 IPR003672 GO:0009058
Aed8g1362 1331 Pfam Domain of unknown function (DUF3479) 83 244 IPR022571 GO:0016851
Aed8g1362 1331 Pfam CobN/Magnesium Chelatase 248 445 IPR003672 GO:0009058
Aed8g1362 1331 CDD CobN_like 158 1202 IPR003672 GO:0009058
Aed8g1362 1331 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 446 1330 IPR003672 GO:0009058
Aed8g1362 1331 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 85 446 IPR003672 GO:0009058
Aed8g1362 1331 TIGRFAM BchH: magnesium chelatase, H subunit 447 1329 IPR011771 GO:0015995|GO:0016851
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1362 Aed-Chr8 17690472 17697048 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1362 K03403 - gmx:100806079 2489.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1362 8 17690472 17697048 Aed8g1362 8 17690472 17697048 ECH
Aed4g0447 4 3285264 3291660 Aed8g1362 8 17690472 17697048 PCT