Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1329 ATGGGAGTTGTTAGCAACGAATATTCAAACGGATCTTCTGCTTCTCATGGCTGCATCAATTTAGAGGAGAAGCTCGACGATCTCCGCAGCCTAGTTGGTAAGGCAGACAGAGATCCTCTGAGAATCGTGAGCGTAGGTGGCGGTGCCTGGGGGAGTGTCTTTGCTGCATTGCTGCAAGACACATACGGCCAATTCCGCGACAAGGTGCAGATCAGGACGTGGAGAAGGCCAGGGAAGGCGGTGGACAGAGCCACGGCAGAGCACCTCTTTGAGGTCATCAACTCCAGGGAGGATGTGCTGAGGAGGCTGATCAGGCGCTGCGCGTATCTGAAATACGTCGAGGCCAGGCTCGGGGACAGGACCCTTCTGGCGGATGAGATTCTCAAAGATGGATTCTGCTTGAACATGATTGACACGCCACTCTGTCCATTGAAGGTTGTCACGAACTTGCAAGAGGCTGTTTGGGATGCTGATATTGTGGTTAATGGCTTGCCTTCAACGGAAACGAGGGAGATTTTCGAGGAGATTAGTAAGTATTGGAAGGAGAGGATCACAGTGCCTGTGATAATCTCTTTGGCTAAGGGTATAGAGGCTGCAATGGAACCTGTTCCTCATATTATAACCCCCACAAAAATGATTAACCAAGCAACTGGAGTGGCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCTTCAGAAATCTACAACAAGGAGTATGCCAATGCTCGAATATGTGGGGATGAGAAATGGAGGAAACCTCTTGCAAAGTTTCTAAGGCAACCACATTTTATTGTCTGGGATAACAGTGACCTTGTCACACATGAGGTCATGGGTGGCTTGAAAAATGTCTATGCAATTGGTGCAGGAATGGTAGCAGCCCTTACCAATGAAAGTGCCACCAGTAAATCTGTATACTTTGCACACTGCACATCAGAGATGATATTTATCACTCACTTGTTGGCTGAAGAGCCTGAGAAACTTGCAGGGCCGTTATTGGCTGACACTTATGTGACTTTACTAAAAGGTCGTAACGCATGGTATGGTCAGATGTTAGCTAAGGGTGAATTAAGCCCAGACATGGGTGACAGCATCAGTGGCAAAGGAATGATTCAGTTAGATGTGAGAGAGTATGAACAAAGGGAAATTTTCTTGATCTGGGAACAGTCATCAGAAGCTATTCTCCAAGCTCTTAGGGATGAAAATCTGAATGATCCCCGTGAACGCATTGAGATTGCACAAAGCCATGCTTTCTACATGCCTTCACTTCTTGGACAACCCTGA 1287 0.4693 MGVVSNEYSNGSSASHGCINLEEKLDDLRSLVGKADRDPLRIVSVGGGAWGSVFAALLQDTYGQFRDKVQIRTWRRPGKAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKGIEAAMEPVPHIITPTKMINQATGVAMENILYLGGPNIASEIYNKEYANARICGDEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQLDVREYEQREIFLIWEQSSEAILQALRDENLNDPRERIEIAQSHAFYMPSLLGQP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1329 428 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 144 246 IPR011128 GO:0016616|GO:0046168|GO:0051287
Aed8g1329 428 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 44 61 IPR006168 GO:0004367|GO:0006072|GO:0009331
Aed8g1329 428 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 265 289 IPR006168 GO:0004367|GO:0006072|GO:0009331
Aed8g1329 428 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 8 373 - -
Aed8g1329 428 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 384 428 - -
Aed8g1329 428 Gene3D - 272 374 IPR013328 GO:0016491
Aed8g1329 428 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 272 366 IPR008927 -
Aed8g1329 428 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 272 361 IPR006109 GO:0004367|GO:0005975
Aed8g1329 428 Gene3D - 22 103 - -
Aed8g1329 428 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 384 428 - -
Aed8g1329 428 Gene3D - 129 268 - -
Aed8g1329 428 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 8 373 - -
Aed8g1329 428 Coils Coil 18 38 - -
Aed8g1329 428 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 40 272 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1329 Aed-Chr8 16905187 16914299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1329 9 428 Acyl Lipid Metabolism Gene Families AT2G41540 80.088 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1329 K00006 - gmx:100797552 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0472 4 3566187 3570543 Aed8g1329 8 16905187 16914299 PCT