Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0879 ATGTCGTCCATTAACCCATCACGCGCTTTCGCCACGCGCCGGCCATGGGAGGAGTTCTTCGCGCTCCACTCCTTCACGCGCCCCTACACCCTCGGCGAGGCCACGGTCCGCATGAACCGAAACCTCGGCCACTTCCGCGTCAACTACGCCTTGCTCGTGCTCCTCGTCGTGTTCCTCAGCCTCCTCTGGCACCCGATCTCCCTCATCGTTTTCCTCGCCGTCTTCGCCGCGTGGTTCTTCCTCTACTTCTTCCGCGACGGCCCCGTTGTCGTGCTCCGCCGCGAGCTCGACGACCGCATCGTCCTCGCGGCGCTCTCCGCCGTCACCATCGCGGCGCTCGTCCTCACCGGCGTCTGGCTGAACGTGGTGGTGGCGCTGCTCGTCGCGGCGGCTCTGGTGGCGCTGCATGCGGCGCTTCGGAGCACCGAGGATTTGTACGTGGATGAATTGGAAGTTTCCGATGGAGGTTTGCTTTCGGTTGTTGATGGTAGCCCTACGAAACGAACAGGATCCGATTTTGTTGAATCAGACTTGCTTGTGCTATGCTATGAAGATGTGAGTCTTAGTACTGAGACTAGCAAGTGTACAACATTTGAGAGAACTGAATAG 609 0.5961 MSSINPSRAFATRRPWEEFFALHSFTRPYTLGEATVRMNRNLGHFRVNYALLVLLVVFLSLLWHPISLIVFLAVFAAWFFLYFFRDGPVVVLRRELDDRIVLAALSAVTIAALVLTGVWLNVVVALLVAAALVALHAALRSTEDLYVDELEVSDGGLLSVVDGSPTKRTGSDFVESDLLVLCYEDVSLSTETSKCTTFERTE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0879 202 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 7 166 IPR004895 -
Aed8g0879 202 Pfam PRA1 family protein 9 149 IPR004895 -
Aed8g0879 202 PANTHER PRA1 FAMILY PROTEIN 7 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0879 Aed-Chr8 7529309 7530400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0879 K20359 - gmx:100777017 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0879 8 7529309 7530400 Aed8g1847 8 23146544 23158076 ECH
Aed8g0879 8 7529309 7530400 Aed8g0879 8 7529309 7530400 ECH
Aed4g0210 4 1529798 1531609 Aed8g0879 8 7529309 7530400 PCT