Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0877 ATGGCAACCATCTCCGCTGCTACCACAACCGCATCGATCACCCGCGCAGCTCTTGTTCAGAGGCGGCCTCTTATTGGGGTCTCATCTCCCGTTCTTGGTTTGCCAGCAATGGGTAAGGTGGGAAGAGTGAGTTGCTCAATGGAGGAGAAGCCTTCTTCAGTGAAGGAAAACAGCAGCTCAAGCATGATGGGGATGGGGGCATCTCTGATGGCAGCTGCCAGTGCTGCAGCCATGTCAGGCCCAGCGATGGCCTTGGTGGATGAGAGACTGAGCACCGAAGGAACCGGGCTTCCCTTTGGCCTCAGCAACAACCTTCTTGGTTGGATCCTCTTCGGTGTCTTTGGTCTTATCTGGGCTCTCTATTTTGTCTACACTGCCACTCTTGAAGAGGATGAAGAGTCTGGACTGTCCCTTTAA 417 0.5396 MATISAATTTASITRAALVQRRPLIGVSSPVLGLPAMGKVGRVSCSMEEKPSSVKENSSSSMMGMGASLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTATLEEDEESGLSL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0877 138 Pfam Photosystem II reaction centre W protein (PsbW) 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
Aed8g0877 138 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
Aed8g0877 138 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0877 Aed-Chr8 7511502 7519945 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0877 K02721 - gmx:100305788 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0877 8 7511502 7519945 Aed8g0877 8 7511502 7519945 ECH
Aed4g0216 4 1556509 1557042 Aed8g0877 8 7511502 7519945 PCT